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Ketomihine

@ketomihine source repo

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• 21 skills
• 0 followers
• 1 week ago last updated

1. ▌
   Envi Pkg Local Improved · ketomihine bundle

   ENVI spatial transcriptomics analysis toolkit - comprehensive documentation with tutorials and Python source code
   1 install
2. ▌
   Cellchat Pkg Local Fixed · ketomihine bundle

   CellChat cell-cell communication analysis toolkit - complete documentation with precise file name-based categorization
   1 install
3. ▌
   Cellcharter Local Optimized · ketomihine bundle

   CellCharter spatial transcriptomics analysis toolkit - complete documentation with precise file name-based categorization
   1 install
4. ▌
   Cellchat Pkg Local Complete · ketomihine bundle

   CellChat 包源码随附的本地教程 + Rd 转换的函数文档 + R 源码 HTML - 完整覆盖173个文件
   1 install
5. ▌
   Xenium Benchmarking Docs Local · ketomihine bundle

   Xenium benchmarking 本地文档快照（全量 HTML）- 包含完整模块文档
   1 install
6. ▌
   Developing Heart Local Improved · ketomihine bundle

   Developing Heart Atlas - comprehensive cardiac development analysis with spatial multi-omics integration
   1 install
7. ▌
   Cellphonedb · ketomihine bundle

   Comprehensive skill for CellPhoneDB - Database of cell type markers and cell-cell communication analysis for single-cell data. Use for cell type annotation, ligand-receptor analysis, cell-cell interaction inference, and communication network visualization.
   1 install
8. ▌
   Banksy Merged · ketomihine bundle

   Combined Banksy notebooks and source code (deduplicated)
   1 install
9. ▌
   Envi Pkg Local · ketomihine bundle

   ENVI 本地文档+教程+源码 - 100%覆盖13个文件（Sphinx build + 手动转换 notebooks/py）
   1 install
10. ▌
    Scglue Complete · ketomihine bundle

    scGLUE 单细胞多组学数据整合工具包 - 100%覆盖文档（完整API+教程+数据整合+图谱分析）
    1 install
11. ▌
    Scvelo Complete · ketomihine bundle

    scVelo RNA速度分析工具包 - 100%覆盖文档（78个文件：完整API+教程+动态建模+可视化）
    1 install
12. ▌
    Banksy Merged V3 · ketomihine bundle

    BANKSY spatial transcriptomics analysis tool - complete documentation with notebooks and source code
    1 install
13. ▌
    Banksy Merged V4 · ketomihine bundle

    BANKSY spatial transcriptomics analysis tool - complete documentation with precise file name-based categorization
    1 install
14. ▌
    Cellcharter Local · ketomihine bundle

    CellCharter 本地离线文档 (Sphinx 构建), 从下载目录启动 HTTP 服务后抓取
    1 install
15. ▌
    Liana Py Complete · ketomihine bundle

    Liana-py 细胞互作分析工具包 - 100%覆盖文档（60个核心文件+72个图片文件）
    1 install
16. ▌
    Scanpy Single Cell Analysis · ketomihine

    Python-based single cell analysis using Scanpy for .h5ad files in conda scanpy environment
    1 install
17. ▌
    Seurat Single Cell Analysis · ketomihine bundle

    R-based single cell analysis using Seurat v5 for .rds/.rdata files
    1 install
18. ▌
    Developing Heart Local · ketomihine bundle

    Developing Heart Atlas notebooks converted to HTML (local)
    1 install
19. ▌
    Remote Server Executor · ketomihine bundle

    Remote SSH server management and code execution with paramiko-based performance optimization
    1 install
20. ▌
    Banksy · ketomihine bundle

    BANKSY spatial transcriptomics analysis - comprehensive documentation with notebooks and API
    1 install
21. ▌
    Archr Local · ketomihine bundle

    ArchR docs served from downloaded_docs/archr_scrape - comprehensive scATAC-seq analysis toolkit with all HTML files explicitly listed
    1 install