Lord1Egypt
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- ▌ Venue Templates 2 · lord1egypt bundleAccess comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant proposals (NSF, NIH, DOE, DARPA). This skill should be used when preparing manuscripts for journal submission, conference papers, research posters, or grant proposals and need venue-specific formatting requirements and templates.
- ▌ Cellxgene Census 2 · lord1egypt bundleQuery the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.
- ▌ Clinical Reports 2 · lord1egypt bundleWrite comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full support with templates, regulatory compliance (HIPAA, FDA, ICH-GCP), and validation tools.
- ▌ Cryptography API 2 · lord1egyptSymmetric/asymmetric encryption, hashing, password salting, and message verification via cryptography library.
- ▌ Function Calling 2 · lord1egyptRegistering custom Python tools, handling parallel function calls, and executing callback routines.
- ▌ Multimodal Video 2 · lord1egyptNative video understanding, event timestamping, frame sampling, and video narrative generation.
- ▌ Nextjs Framework 2 · lord1egyptBuilding modern React web applications with Server-Side Rendering (SSR), API routes, and routing layouts in Next.js.
- ▌ Optimize For Gpu 2 · lord1egypt bundleGPU-accelerate Python code using CuPy, Numba CUDA, Warp, cuDF, cuML, cuGraph, KvikIO, cuCIM, cuxfilter, cuVS, cuSpatial, and RAFT. Use whenever the user mentions GPU/CUDA/NVIDIA acceleration, or wants to speed up NumPy, pandas, scikit-learn, scikit-image, NetworkX, GeoPandas, or Faiss workloads. Covers physics simulation, differentiable rendering, mesh ray casting, particle systems (DEM/SPH/fluids), vector/similarity search, GPUDirect Storage file IO, interactive dashboards, geospatial analysis, medical imaging, and sparse eigensolvers. Also use when you see CPU-bound Python code (loops, large arrays, ML pipelines, graph analytics, image processing) that would benefit from GPU acceleration, even if not explicitly requested.
- ▌ Resend Email API 2 · lord1egyptSending programmatic, HTML transactional emails with custom domains using Resend.
- ▌ Search Grounding 2 · lord1egyptReal-time Google Search grounding, live web query integration, and web source citation extraction.
- ▌ Security Headers 2 · lord1egyptImplementing Content Security Policy (CSP), CORS, and essential security headers in web server responses.
- ▌ Flask Restful API 2 · lord1egyptStructuring clean, resource-based HTTP REST endpoints using Flask and Flask-RESTful routing.
- ▌ Github Actions CI 2 · lord1egyptConfiguring GitHub Actions workflows for continuous integration, testing, and deployment automation.
- ▌ Literature Review 2 · lord1egypt bundleConduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).
- ▌ Omero Integration 2 · lord1egypt bundleMicroscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.
- ▌ Omics Integration 2 · lord1egyptMulti-omics data integration using MOFA+, DIABLO, and MixOmics for combining genomics, transcriptomics, proteomics, metabolomics, and epigenomics datasets. Use for identifying shared variation across omics layers, building integrative biomarker models, and discovering cross-modal biological patterns. Best for paired multi-omics cohort studies.
- ▌ PDF Parsing Utils 2 · lord1egyptExtracting structured text tables and content blocks from PDF files using PyPDF or pdfplumber.
- ▌ Pydantic Settings 2 · lord1egyptManaging environment variables, validating system configurations, and parsing .env configurations using Pydantic Settings.
- ▌ Pytorch Lightning 2 · lord1egypt bundleDeep learning framework (PyTorch Lightning). Organize PyTorch code into LightningModules, configure Trainers for multi-GPU/TPU, implement data pipelines, callbacks, logging (W&B, TensorBoard), distributed training (DDP, FSDP, DeepSpeed), for scalable neural network training.
- ▌ Scientific Slides 2 · lord1egypt bundleBuild slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design templates, timing guidance, and visual validation. Works with PowerPoint and LaTeX Beamer.
- ▌ Stable Baselines3 2 · lord1egypt bundleProduction-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasium environments. For high-performance parallel training, multi-agent systems, or custom vectorized environments, use pufferlib instead.
- ▌ Structured Output 2 · lord1egyptStructured data extraction using Pydantic schemas, strict JSON output formats, and schema validation.
- ▌ Accessibility A11Y 2 · lord1egyptImplementing WCAG accessibility guidelines, semantic HTML5, and screen reader ARIA roles.
- ▌ Audio Intelligence 2 · lord1egyptNative audio understanding, transcription, speech tone analysis, sound classification, and multi-speaker transcription.
- ▌ Data Anthropic CLI 2 · lord1egyptReference documentation for the ant CLI covering installation, authentication, command structure, input and output shaping, managed agents workflows, and scripting patterns
- ▌ Git Workflow Utils 2 · lord1egyptAdvanced git operations including branching, commits, merge conflicts, tag creation, and history manipulation.
- ▌ Image Optimization 2 · lord1egyptResizing, compressing formats, and applying image filters using Pillow.
- ▌ Logging Monitoring 2 · lord1egyptConfiguring Python logging library, formatting streams, and managing rotating logs.
- ▌ Playwright Browser 2 · lord1egyptAutomated headless web browser testing, page interactions, screenshot capture, and web scraping.
- ▌ Prometheus Metrics 2 · lord1egyptInstrumenting system diagnostics, counting requests, and exporting metrics to Prometheus monitoring systems.
- ▌ Scientific Writing 2 · lord1egypt bundleCore skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing prose. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting guidelines (CONSORT/STROBE/PRISMA), for research papers and journal submissions.
- ▌ Skill Verify Skill 2 · lord1egyptSkill for opinionated verification workflow for validating code changes.
- ▌ Websockets Network 2 · lord1egyptAsynchronous bi-directional WebSocket client and server configuration in Python.
- ▌ Citation Management 2 · lord1egypt bundleComprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.
- ▌ Proteomics Analysis 2 · lord1egyptMass spectrometry-based proteomics data analysis with pyteomics, spectrum_utils, and MaxQuant/DIA-NN output processing. Use for peptide identification, protein quantification (LFQ, TMT, SILAC), differential expression, PTM analysis, and proteomics data visualization. Covers both DDA and DIA proteomics workflows.
- ▌ Agent Prompt Claude Md Creation 2 · lord1egyptSystem prompt for analyzing codebases and creating CLAUDE.md documentation files
- ▌ Agent Prompt Quick Pr Creation 2 · lord1egyptStreamlined prompt for creating a commit and pull request with pre-populated context
- ▌ Agent Prompt Status Line Setup 2 · lord1egyptSystem prompt for the statusline-setup agent that configures status line display
- ▌ Data Claude API Reference Curl 2 · lord1egyptRaw API reference for Claude API for use with cURL or else Raw HTTP
- ▌ Data Claude API Reference Java 2 · lord1egyptJava SDK reference including installation, client initialization, basic requests, streaming, and beta tool use
- ▌ Data Claude API Reference Ruby 2 · lord1egyptRuby SDK reference including installation, client initialization, basic requests, streaming, and beta tool runner
- ▌ Data Tool Use Reference Python 2 · lord1egyptPython tool use reference including tool runner, manual agentic loop, code execution, and structured outputs
- ▌ System Prompt Option Previewer 2 · lord1egyptSystem prompt for previewing UI options in a side-by-side layout
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- ▌ System Reminder Ultraplan Mode 2 · lord1egyptSystem reminder for using Ultraplan mode to create a detailed implementation plan with multi-agent exploration and critique.
- ▌ Tool Description Enterplanmode 2 · lord1egyptTool description for entering plan mode to explore and design implementation approaches
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- ▌ Tool Parameter Computer Action 2 · lord1egyptAction parameter options for the Chrome browser computer tool
- ▌ Agent Prompt Claude Guide Agent 2 · lord1egyptSystem prompt for the claude-guide agent that helps users understand and use Claude Code, the Claude Agent SDK and the Claude API effectively.
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- ▌ Data Files API Reference Python 2 · lord1egyptPython Files API reference including file upload, listing, deletion, and usage in messages
- ▌ Data HTTP Error Codes Reference 2 · lord1egyptReference for HTTP error codes returned by the Claude API with common causes and handling strategies
- ▌ Data Live Documentation Sources 2 · lord1egyptWebFetch URLs for fetching current Claude API and Agent SDK documentation from official sources
- ▌ Data Streaming Reference Python 2 · lord1egyptPython streaming reference including sync/async streaming and handling different content types
- ▌ Skill Design Sync Slash Command 2 · lord1egyptSkill definition for syncing a React design system to claude.ai/design, including project selection, source-shape detection, converter configuration, validation, upload planning, and self-check behavior
- ▌ Skill Update Claude Code Config 2 · lord1egyptSkill for modifying Claude Code configuration file (settings.json).
- ▌ Agent Prompt Batch Slash Command 2 · lord1egyptInstructions for orchestrating a large, parallelizable change across a codebase.
- ▌ Agent Prompt Webfetch Summarizer 2 · lord1egyptPrompt for agent that summarizes verbose output from WebFetch for the main model
- ▌ Data Claude API Reference Python 2 · lord1egyptPython SDK reference including installation, client initialization, basic requests, thinking, and multi-turn conversation
- ▌ Skill Dream Memory Consolidation 2 · lord1egyptSkill definition for the /dream nightly housekeeping job that consolidates recent logs and transcripts into persistent memory topics, learnings, and a pruned MEMORY.md index
- ▌ Skill Run Web Server API Example 2 · lord1egyptExample file for the Run app skill showing how to document a server or API lifecycle with background launch, readiness checks, curl verification, and shutdown
- ▌ System Prompt Agent Thread Notes 2 · lord1egyptBehavioral guidelines for agent threads covering absolute paths, response formatting, emoji avoidance, and tool call punctuation
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- ▌ Agent Prompt Dream Memory Pruning 2 · lord1egyptInstructs an agent to perform a memory pruning pass by deleting stale or invalidated memory files and collapsing duplicates in the memory directory
- ▌ Data Managed Agents Core Concepts 2 · lord1egyptReference documentation for the Managed Agents API covering core concepts (Agents, Sessions, Environments, Containers), lifecycle, versioning, endpoints, and usage patterns
- ▌ Data User Profile Memory Template 2 · lord1egyptTemplate content for the user profile memory file, covering personal details, work context, schedule, and communication preferences
- ▌ Skill Catch Up Periodic Heartbeat 2 · lord1egyptSkill definition for the /catch-up periodic heartbeat that scans current priorities, triages actionable changes, reports a short digest, and updates catch-up state
- ▌ Skill Morning Checkin Daily Brief 2 · lord1egyptSkill definition for the /morning-checkin scheduled task that prepares a daily calendar and inbox digest, schedules pre-meeting check-ins, and records the day’s top priority
- ▌ System Prompt Communication Style 2 · lord1egyptInstructs Claude to give brief, user-facing updates at key moments during tool use, write concise end-of-turn summaries, match response format to task complexity, and avoid comments and planning documents in code
- ▌ System Prompt Hooks Configuration 2 · lord1egyptSystem prompt for hooks configuration. Used for above Claude Code config skill.
- ▌ System Prompt Memory Instructions 2 · lord1egyptInstructions for using persistent file-based memory, including memory file format, scope, indexing, and stale-memory handling
- ▌ System Prompt Worker Instructions 2 · lord1egyptInstructions for workers to follow when implementing a change
- ▌ System Reminder Btw Side Question 2 · lord1egyptSystem reminder for /btw slash command side questions without tools
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- ▌ Tool Description Pushnotification 2 · lord1egyptTool description for PushNotification. This is a tool that sends a desktop notification in the user's terminal and pushes to their phone if Remote Control is connected.
- ▌ Data Managed Agents Reference Curl 2 · lord1egyptProvides cURL and raw HTTP request examples for the Managed Agents API including environment, agent, and session lifecycle operations
- ▌ Data Tool Use Reference Typescript 2 · lord1egyptTypeScript tool use reference including tool runner, manual agentic loop, code execution, and structured outputs
- ▌ System Prompt Doing Tasks Security 2 · lord1egyptAvoid introducing security vulnerabilities like injection, XSS, etc.
- ▌ System Prompt Harness Instructions 2 · lord1egyptCore interactive-agent identity and harness instructions for terminal markdown output, permissions, system reminders, compaction, tool use, and code references
- ▌ System Prompt Insights Suggestions 2 · lord1egyptGenerates actionable suggestions including CLAUDE.md additions, features to try, and usage patterns
- ▌ System Prompt Scratchpad Directory 2 · lord1egyptInstructions for using a dedicated scratchpad directory for temporary files
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- ▌ System Reminder Plan Mode Re Entry 2 · lord1egyptSystem reminder sent when the user enters Plan mode after having previously exited it either via shift+tab or by approving Claude's plan.
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- ▌ Tool Description Agent Usage Notes 2 · lord1egyptUsage notes and instructions for the Task/Agent tool, including guidance on launching subagents, background execution, resumption, and worktree isolation
- ▌ Tool Description Bash Maintain Cwd 2 · lord1egyptTry to maintain your current working directory throughout the session by using absolute paths and avoiding usage of `cd`. You may use `cd` if the User explicitly requests it. In particular, never prepend `cd <current-directory>` to a `git` command — `git` already operates on the current working tree, and the compound triggers a permission prompt.
- ▌ Agent Prompt Schedule Slash Command 2 · lord1egyptGuides the user through scheduling, updating, listing, or running remote Claude Code agents on cron triggers via the Anthropic cloud API
- ▌ Agent Prompt Simplify Slash Command 2 · lord1egyptInstructions for the /simplify slash command that reviews changed code for reuse, simplification, efficiency, and altitude cleanups, then applies the fixes
- ▌ Data Files API Reference Typescript 2 · lord1egyptTypeScript Files API reference including file upload, listing, deletion, and usage in messages
- ▌ Data Managed Agents Client Patterns 2 · lord1egyptReference guide of common client-side patterns for driving Managed Agent sessions, including stream reconnection, idle-break gating, tool confirmations, interrupts, and custom tools
- ▌ Data Streaming Reference Typescript 2 · lord1egyptTypeScript streaming reference including basic streaming and handling different content types
- ▌ Skill Dynamic Pacing Loop Execution 2 · lord1egyptStep-by-step instructions for executing a dynamic pacing loop that runs tasks, arms persistent monitors for event-gated waits, schedules fallback heartbeat ticks, and handles task notifications
- ▌ System Prompt Autonomous Loop Check 2 · lord1egyptDefines behavior for autonomous timer-based invocations, guiding Claude to continue established work, maintain PRs, and handle repeated idle checks while the user is away
- ▌ System Prompt Fork Usage Guidelines 2 · lord1egyptInstructions for when to fork subagents and rules against reading fork output mid-flight or fabricating fork results
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