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panjose

@panjose source repo

50 published skills

  1. Co Scientist Run 2 · panjose
    co-scientist-run
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  2. Co Scientist Start 2 · panjose
    co-scientist-start
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  3. Co Scientist Doctor 2 · panjose
    co-scientist-doctor
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  4. Co Scientist Params 2 · panjose
    co-scientist-params
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  5. Co Scientist Resume 2 · panjose
    co-scientist-resume
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  6. Co Scientist Validate 2 · panjose
    co-scientist-validate
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  7. Co Scientist Dashboard 2 · panjose
    co-scientist-dashboard
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  8. Co Scientist Doctor · panjose
    Diagnose the local Co-Scientist host-agent environment from Codex.
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  9. Co Scientist Params · panjose
    Show the supported Co-Scientist start parameters for Codex users.
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  10. Co Scientist Resume · panjose
    Resume an interrupted Co-Scientist run from Codex.
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  11. Co Scientist Install · panjose
    co-scientist-install
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  12. Co Scientist Validate · panjose
    Validate one Co-Scientist run directory from Codex.
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  13. Co Scientist Dashboard · panjose
    Resolve dashboard links for one Co-Scientist run from Codex.
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  14. Island Select · panjose
    Select the next island strategy and parent hypothesis set for one evolution round.
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  15. Research Config · panjose
    Generate a `ResearchPlan` from `input.md` or equivalent raw research input.
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  16. Strategy Router · panjose
    Produce the current `state/STRATEGY_PLAN.json` bundle for configuration, generation, review, evolution, or overview routing.
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  17. Convergence Check · panjose
    Evaluate whether a hypothesis newly entered the current top-k set and update the convergence counter deterministically.
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  18. Literature Search · panjose
    Run the canonical literature search bridge for one evidence query and persist traceable evidence artifacts.
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  19. Run Policy Router · panjose
    Interpret the user's high-level research intent into `RUN_POLICY.yaml` and `state/POLICY_DECISION.json`.
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  20. Dashboard Snapshot · panjose
    Assemble a dashboard-ready snapshot from the canonical state.
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  21. Ranking Elo Update · panjose
    Apply deterministic Elo updates for one completed tournament batch, persist touched hypotheses, and write the ranking update receipt.
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  22. Co Scientist Pipeline · panjose
    Run the full Co-Scientist pipeline for one research run.
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  23. Insights From Reviews · panjose
    Extract recurring critique patterns from the completed review of a hypothesis.
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  24. Hypothesis Full Review · panjose
    Run the full literature-grounded review for a hypothesis.
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  25. Hypothesis Evolution Loop · panjose
    Run the iterative evolution loop from the current persisted run state until convergence.
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  26. Hypothesis Initial Review · panjose
    Run the initial review gate for a hypothesis.
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  27. Hypothesis Review Summary · panjose
    Summarize the completed reviews for a hypothesis.
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  28. Hypothesis Generate Debate · panjose
    Generate exactly one hypothesis candidate through a structured scientific debate.
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  29. Hypothesis Review Pipeline · panjose
    Run the decomposed review pipeline for a single hypothesis and persist each review stage as a structured artifact.
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  30. Research Overview Pipeline · panjose
    Generate the final research overview from the top-ranked hypotheses.
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  31. Hypothesis Evolve Coherence · panjose
    Generate exactly one child hypothesis that improves logical coherence, causal consistency, and assumption hygiene.
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  32. Hypothesis Evolve Grounding · panjose
    Generate exactly one grounded child hypothesis by strengthening evidence, specificity, and literature support.
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  33. Hypothesis Proximity Update · panjose
    Update hypothesis proximity state by invoking the canonical embedding bridge for one hypothesis.
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  34. Hypothesis Ranking Pipeline · panjose
    Update ranking artifacts for one reviewed hypothesis using canonical placement-opponent selection, ranked-frontier selection, tournament judgments, and Elo updates.
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  35. Hypothesis Deep Verification · panjose
    Run the assumption decomposition and deep verification review for a hypothesis.
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  36. Hypothesis Evolve Out Of Box · panjose
    Generate exactly one divergent but still testable child hypothesis that challenges the shared assumptions of the parent set.
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  37. Hypothesis Ranked Tournament · panjose
    Judge one ranked-tournament matchup between two top frontier hypotheses.
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  38. Hypothesis Simulation Review · panjose
    Simulate the hypothesis mechanism and identify failure scenarios.
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  39. Evolution Strategy Supervisor · panjose
    Choose exactly one concrete evolution strategy for the active evolution round.
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  40. Hypothesis Evolve Combination · panjose
    Generate exactly one child hypothesis by combining complementary strengths from multiple parent hypotheses.
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  41. Hypothesis Evolve Feasibility · panjose
    Generate exactly one child hypothesis that is more experimentally and operationally feasible than its parent.
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  42. Hypothesis Evolve Inspiration · panjose
    Generate exactly one cross-parent child hypothesis by transferring a useful principle from one parent context into another.
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  43. Hypothesis Observation Review · panjose
    Evaluate a hypothesis against prior observations.
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  44. Hypothesis Generate Literature · panjose
    Generate exactly one literature-grounded hypothesis candidate for the active round.
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  45. Hypothesis Generation Pipeline · panjose
    Dispatch one enabled generation strategy for a given `ResearchPlan`.
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  46. Hypothesis Generate Assumptions · panjose
    Generate exactly one hypothesis candidate by enumerating and combining testable assumptions.
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  47. Hypothesis Placement Tournament · panjose
    Judge one placement-tournament matchup between a candidate hypothesis and one opponent.
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  48. Hypothesis Evolve Simplification · panjose
    Generate exactly one child hypothesis that preserves the core idea while reducing unnecessary complexity.
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  49. Co Scientist Run · panjose
    Bootstrap an existing Co-Scientist run directory from Codex.
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  50. Co Scientist Start · panjose
    Start one Co-Scientist run from Codex using a research goal or imported brief.
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