Coding & Dev Tools

sboghossian-mini-claude-for-legal Skill

Use when a junior litigator or litigation trainee wants to build courtroom and advocacy skills through simulation-based training without client-matter risk. Orchestrates the full suite of casesim skills — judge-bench questioning, opposing-counsel modeling, witness Q&A coaching, and settlement EV analysis — into a coherent litigation coaching experience. Distinct from individual casesim skills in that it provides an end-to-end training curriculum for litigators, not just a single simulation tool.

sboghossian-mini-claude-for-legal Skill

Use when a pre-Series A startup founder or startup ecosystem participant asks about HAQQ's startup program — free access for qualifying startups in MENA, Africa, and Eastern Europe, credits-based usage, and an optional mentoring track. Delivers program terms, eligibility criteria, application process, and value proposition for early-stage companies that need legal AI without enterprise budgets.

sboghossian-mini-claude-for-legal Skill

Use when a consumer user (B2C persona) is navigating a distressing legal situation — layoff, divorce, eviction, arrest, debt collection, immigration issue, or other high-stress legal event — and the response must lead with empathy before substance. Governs the opening pattern, tone, forbidden phrases, and the 24-hour grace period before any upsell attempt. P0 behavioral rule for all consumer-mode interactions with emotionally charged legal content.

sboghossian-mini-claude-for-legal Skill

Use when a user wants to draft a will or testament and Claude must gather the testator's personal details, asset picture, family structure, religious regime applicability, and jurisdictional exposure before producing a drafting strategy. Triggers on requests to prepare a last will and testament, estate plan, or succession instrument. Sensitive intake — handle with care. Covers Sharia forced-heirship rules (KSA, UAE, LB, EG), DIFC/ADGM Wills for non-Muslim UAE asset-holders, and civil-law forced-heirship (France, Lebanon).

sboghossian-mini-claude-for-legal Skill

Use as the master structural template for drafting any commercial contract. All document-type draft skills inherit this skeleton. Defines the standard 13-part structure — title, parties, recitals, definitions, operative provisions, reps and warranties, covenants, conditions, term and termination, confidentiality, boilerplate, signature block, and schedules — with jurisdiction-specific guidance on which parts civil-law and common-law systems handle differently. The first skill to invoke when building any contract from scratch.

sboghossian-mini-claude-for-legal Skill

Use when preparing an incorporation package for a company in Saudi Arabia. Covers MISA investment license for foreign-owned entities, MOC name reservation and Articles, capital deposit, Commercial Registration (CR), ZATCA tax/zakat registration, GOSI and Qiwa employee registration, municipal license for physical premises, and Saudization (Nitaqat) compliance requirements. Distinguishes LLC, JSC, and branch structures under the Saudi Company Law 2022.

sboghossian-mini-claude-for-legal Skill

Use when scoring AI legal output on the safety dimension — whether the response avoids giving affirmatively harmful advice, maintains appropriate scope limitations, handles out-of-scope requests correctly, and includes necessary escalation cues. A 0–5 rubric that catches dangerous outputs that legal soundness and hallucination detection might miss.

autohandai-community-skills Bundle

Runs the end-of-day maintainer handoff for NemoClaw. Checks version target progress, bumps stragglers to the next patch version, generates a QA handoff summary, and cuts the release tag. Use at the end of the workday. Trigger keywords - evening, end of day, EOD, wrap up, ship it, cut tag, handoff, done for the day.

autohandai-community-skills Bundle

Detects DNS tunneling by computing Shannon entropy of DNS query names, analyzing query length distributions, inspecting TXT record payloads, and identifying high subdomain cardinality. Uses scapy for packet capture analysis and statistical methods to distinguish legitimate DNS from covert channels. Use when hunting for data exfiltration.

autohandai-community-skills Bundle

Container escape is a critical attack technique where an adversary breaks out of container isolation to access the host system or other containers. Detection involves monitoring for escape indicators

autohandai-community-skills Bundle

Detects credential stuffing attacks by analyzing authentication logs for login velocity anomalies, ASN diversity, password spray patterns, and geographic distribution of failed logins. Uses statistical analysis on Splunk or raw log data. Use when investigating account takeover campaigns or building detection rules for auth abuse.

autohandai-community-skills Bundle

Add a new cuTile GPU kernel operator to TileGym. Covers dispatch registration in ops.py, cuTile backend implementation, __init__.py exports, test creation, and benchmark in tests/benchmark. Use when adding, creating, or implementing a new cuTile operator/kernel in TileGym, or when asking how to register a new cuTile op.

gptomics Bundle

Generates 3D conformer ensembles using RDKit ETKDGv3 with knowledge-enhanced distance geometry, MMFF94/UFF force-field optimization, CREST + GFN2-xTB semi-empirical refinement, and macrocycle-aware torsion preferences. Provides explicit decision rules for single vs ensemble conformer use, RMSD pruning, energy windows, conformer count, and force-field choice. Use when preparing 3D ligands for docking, generating descriptor input for 3D QSAR, or sampling macrocycle/peptide conformational ensembles.

gptomics Bundle

Enumerates virtual chemical libraries via reaction SMARTS transformations using RDKit and reaction templates, with explicit handling of atom mapping, RDChiral template extraction, product validation, RECAP/BRICS fragmentation, R-group decomposition, matched molecular pair analysis (MMPA), and Free-Wilson analysis. Use when generating combinatorial libraries from building blocks, enumerating analog series, deriving structure-activity rules, or extracting transformations from reaction data.

gptomics Bundle

Performs molecular similarity searching using Tanimoto, Tversky, Dice, and cosine coefficients on bit/count fingerprints with explicit choice rules for symmetric vs asymmetric measures, scaffold-hopping vs lead-optimization regimes, activity-cliff diagnosis, and large-library nearest-neighbor methods (BulkTanimoto, MHFP6 LSH forest, USRCAT). Use when ranking compounds by structural resemblance to a query, clustering libraries, finding analogs, or diagnosing activity cliffs.

gptomics Bundle

Queries gnomAD v4 (807k samples), v3, v2.1.1, and constraint metrics with grpmax FAF95, bottleneck-group exclusion, LOEUF interpretation, SV/CNV/mtDNA catalogs, and Whiffin max-credible-AF framework. Use when filtering rare variants, applying ACMG BS1/BA1, ranking genes by LoF intolerance, or selecting between v2 (GRCh37 + chrX/Y constraint) and v4 (GRCh38 + 807k samples).

gptomics Bundle

Query protein-protein and gene interaction databases (STRING, BioGRID, IntAct, SIGNOR, Reactome, HuRI, HuMAP, OmniPath, ConsensusPathDB, DIP). Use when building PPI networks, choosing between physical vs functional vs genetic interactions, signed/directed vs undirected, high-throughput vs curated, picking confidence thresholds, aggregating across resources, or navigating license constraints. Encodes the database decision matrix, STRING v12 channel semantics, OmniPath as meta-database, SIGNOR for signed signaling, and per-resource rate limits.

gptomics Bundle

Performs differential expression on bulk RNA-seq count data with DESeq2's negative-binomial GLM, Wald and LRT testing, apeglm/ashr/normal LFC shrinkage, independent filtering, Cook's outlier handling, VST/rlog transforms, and design formulas including paired, batch, and interaction terms. Use when running bulk DE, choosing DESeq2 over edgeR or limma-voom, building a paired or interaction design, applying LFC shrinkage for ranking or GSEA, choosing Wald vs LRT, troubleshooting padj=NA, picking VST vs rlog, importing salmon/kallisto via tximport, or analyzing prokaryotic RNA-seq.

gptomics Bundle

Analyzes species-environment relationships with constrained ordination (CCA, RDA, db-RDA), variance partitioning, indicator species (indicspecies IndVal.g group-equalized), PERMANOVA paired MANDATORILY with PERMDISP (Anderson & Walsh 2013; dispersion confounds centroid tests), Joint Species Distribution Models (HMSC, sjSDM, gjam) with explicit rejection of "residual covariance equals biotic interaction", phylogenetic community ecology (SES_MPD/MNTD), trait-environment via RLQ + fourth-corner with corrected modeltype=6 (Dray 2014), bipartite network metrics (NODF, modularity) with curveball null (Strona 2014), and Mantel-test replacements (dbRDA, GDM) for spatial data. Use when testing how environmental gradients structure communities, identifying habitat indicator taxa, partitioning variance among predictors, deciding whether PERMANOVA significance is location vs dispersion, picking among HMSC/sjSDM/gjam, or replacing Mantel tests for landscape data.

freedomintelligence Bundle

Enumerates chemical libraries through reaction SMARTS transformations using RDKit. Generates virtual compound libraries from building blocks using defined chemical reactions with product validation. Use when creating combinatorial libraries or enumerating products from synthetic routes.

freedomintelligence Bundle

Performs molecular similarity searches using Tanimoto coefficient on fingerprints via RDKit. Finds structurally similar compounds using ECFP or MACCS keys and clusters molecules by structural similarity using Butina clustering. Use when finding analogs of a query compound or clustering chemical libraries.

freedomintelligence Bundle

Parse and analyze multiple sequence alignments using Biopython. Extract sequences, identify conserved regions, analyze gaps, work with annotations, and manipulate alignment data for downstream analysis. Use when parsing or manipulating multiple sequence alignments.

freedomintelligence Bundle

Visualize ChIP-seq data using deepTools, Gviz, and ChIPseeker. Create heatmaps, profile plots, and genome browser tracks. Visualize signal around peaks, TSS, or custom regions. Use when visualizing ChIP-seq signal and peaks.

freedomintelligence Bundle

DNA methylation analysis with methylKit in R. Import Bismark coverage files, filter by coverage, normalize samples, and perform statistical comparisons. Use when analyzing single-base methylation patterns, comparing samples, or preparing data for DMR detection.

freedomintelligence Bundle

Gene Ontology over-representation analysis using clusterProfiler enrichGO. Use when identifying biological functions enriched in a gene list from differential expression or other analyses. Supports all three ontologies (BP, MF, CC), multiple ID types, and customizable statistical thresholds.

freedomintelligence Bundle

KEGG pathway and module enrichment analysis using clusterProfiler enrichKEGG and enrichMKEGG. Use when identifying metabolic and signaling pathways over-represented in a gene list. Supports 4000+ organisms via KEGG online database.

freedomintelligence Bundle

Annotate ChIP-seq peaks to genomic features and genes using ChIPseeker. Assign peaks to promoters, exons, introns, and intergenic regions. Find nearest genes and calculate distance to TSS. Generate annotation plots and statistics. Use when annotating ChIP-seq peaks to genomic features.

freedomintelligence Bundle

Calculate alignment statistics including sequence identity, conservation scores, substitution matrices, and similarity metrics. Use when comparing alignment quality, measuring sequence divergence, and analyzing evolutionary patterns.

freedomintelligence Bundle

Differentially methylated region (DMR) detection using methylKit tiles, bsseq BSmooth, and DMRcate. Use when identifying contiguous genomic regions with methylation differences between experimental conditions or cell types.

freedomintelligence Bundle

Deep learning-based variant calling with Google DeepVariant. Provides high accuracy for germline SNPs and indels from Illumina, PacBio, and ONT data. Use when calling variants with DeepVariant deep learning caller.

freedomintelligence Bundle

Identify likely causal variants within GWAS loci using SuSiE for sum of single effects regression and FINEMAP for shotgun stochastic search. Computes posterior inclusion probabilities and credible sets to prioritize variants for functional follow-up. Use when narrowing GWAS association signals to candidate causal variants or building credible sets for functional validation.

freedomintelligence Bundle

Bisulfite sequencing read alignment using Bismark with bowtie2/hisat2. Handles genome preparation and produces BAM files with methylation information. Use when aligning WGBS, RRBS, or other bisulfite-converted sequencing reads to a reference genome.

freedomintelligence Bundle

Decompose genetic effects into direct and indirect paths through mediating variables using the mediation R package. Tests whether gene expression, methylation, or other molecular phenotypes mediate the effect of genetic variants on disease. Use when testing whether a molecular phenotype mediates the genotype-to-phenotype relationship.

autohandai-community-skills Bundle

Detect dangerous ACL misconfigurations in Active Directory using ldap3 to identify GenericAll, WriteDACL, and WriteOwner abuse paths

autohandai-community-skills Bundle

Reverse engineer Go-compiled malware using Ghidra with specialized scripts for function recovery, string extraction, and type reconstruction in stripped Go binaries.

autohandai-community-skills Bundle

URLScan.io is a free service for scanning and analyzing suspicious URLs. It captures screenshots, DOM content, HTTP transactions, JavaScript behavior, and network connections of web pages in an isolat