Docs & Writing

pjt222 Skill

Guide a person through structured learning of a new topic, technology, or skill. AI acts as learning coach — assessing current knowledge, designing a learning path, walking through material, testing understanding, adapting difficulty, and planning review sessions for retention. Use when a person wants to learn a new technology and does not know where to start, when someone feels overwhelmed by documentation, when a person keeps forgetting material and needs spaced repetition, or when transitioning between domains and needing a gap analysis.

pjt222 Skill

Guide a person in becoming a better teacher and explainer. AI coaches content structuring, audience calibration, explanation clarity, Socratic questioning technique, feedback interpretation, and reflective practice for technical presentations, documentation, and mentoring. Use when a person needs to present technical content and wants preparation coaching, wants to write better documentation or tutorials, struggles to explain concepts across expertise levels, is mentoring a colleague, or is preparing for a talk or knowledge-sharing session.

pjt222 Skill

Create R package vignettes using R Markdown or Quarto. Covers vignette setup, YAML configuration, code chunk options, building and testing, CRAN requirements for vignettes. Use when adding Getting Started tutorial, documenting complex workflows spanning multiple functions, creating domain-specific guides, or when CRAN submission requires user-facing documentation beyond function help pages.

pjt222 Skill

Format a Quarto or R Markdown report following APA 7th edition style. Covers apaquarto/papaja packages, title page, abstracts, citations, tables, figures, and reference formatting. Use when writing an academic paper in APA format, creating a psychology or social science research report, generating reproducible manuscripts with embedded analysis, or preparing a thesis or dissertation chapter.

pjt222 Skill

Format a Quarto or R Markdown report following APA 7th edition style. Covers apaquarto/papaja packages, title page, abstracts, citations, tables, figures, and reference formatting. Use when writing an academic paper in APA format, creating a psychology or social science research report, generating reproducible manuscripts with embedded analysis, or preparing a thesis or dissertation chapter.

pjt222 Skill

Create, merge, and deduplicate BibTeX bibliography files using R packages (RefManageR, bibtex). Parse .bib files into structured R objects, merge multiple bibliographies with deduplication by DOI or title similarity, generate entries from DOI/ISBN/arXiv ID, and export clean sorted .bib files. Use when creating a new .bib file for an R Markdown or Quarto project, merging bibliographies from multiple collaborators, deduplicating a .bib that has grown through copy-paste accumulation, or generating BibTeX entries programmatically from DOIs or other identifiers.

pjt222 Skill

Set up an R project structure compliant with GxP regulations (21 CFR Part 11, EU Annex 11). Covers validated environments, qualification documentation, change control, and electronic records requirements. Use when starting an R analysis project in a regulated environment (pharma, biotech, medical devices), setting up R for clinical trial analysis, creating a validated computing environment for regulatory submissions, or implementing 21 CFR Part 11 or EU Annex 11 requirements.

pjt222 Skill

Compute and analyze gematria (Hebrew numerical values) using standard, ordinal, and reduced methods. Covers word-to-number conversion, isopsephy comparisons, and interpretive frameworks. Use when computing the numerical value of a Hebrew word or phrase, comparing two words for shared gematria values, studying a biblical verse or divine name for numerical correspondences, or connecting a numerical result to its position on the Tree of Life.

pjt222 Skill

Remove dead code, unused imports, fix lint warnings, and normalize formatting across a codebase without changing business logic or architecture. Use when lint warnings have piled up during rapid development, unused imports and variables clutter files, dead code paths were never removed, formatting is inconsistent, or static analysis tools report fixable hygiene issues.

pjt222 Skill

Guide a person through structured learning of a new topic, technology, or skill. AI acts as learning coach — assessing current knowledge, designing a learning path, walking through material, testing understanding, adapting difficulty, and planning review sessions for retention. Use when a person wants to learn a new technology and does not know where to start, when someone feels overwhelmed by documentation, when a person keeps forgetting material and needs spaced repetition, or when transitioning between domains and needing a gap analysis.

pjt222 Skill

Guide a person in becoming a better teacher and explainer. AI coaches content structuring, audience calibration, explanation clarity, Socratic questioning technique, feedback interpretation, and reflective practice for technical presentations, documentation, and mentoring. Use when a person needs to present technical content and wants preparation coaching, wants to write better documentation or tutorials, struggles to explain concepts across expertise levels, is mentoring a colleague, or is preparing for a talk or knowledge-sharing session.

pjt222 Skill

Create R package vignettes using R Markdown or Quarto. Covers vignette setup, YAML configuration, code chunk options, building and testing, and CRAN requirements for vignettes. Use when adding a Getting Started tutorial, documenting complex workflows spanning multiple functions, creating domain-specific guides, or when CRAN submission requires user-facing documentation beyond function help pages.

pjt222 Skill

Create, merge, and deduplicate BibTeX bibliography files using R packages (RefManageR, bibtex). Parse .bib files into structured R objects, merge multiple bibliographies with deduplication by DOI or title similarity, generate entries from DOI/ISBN/arXiv ID, and export clean sorted .bib files. Use when creating a new .bib file for an R Markdown or Quarto project, merging bibliographies from multiple collaborators, deduplicating a .bib that has grown through copy-paste accumulation, or generating BibTeX entries programmatically from DOIs or other identifiers.

pjt222 Skill

Set up an R project structure compliant with GxP regulations (21 CFR Part 11, EU Annex 11). Covers validated environments, qualification documentation, change control, and electronic records requirements. Use when starting an R analysis project in a regulated environment (pharma, biotech, medical devices), setting up R for clinical trial analysis, creating a validated computing environment for regulatory submissions, or implementing 21 CFR Part 11 or EU Annex 11 requirements.

pjt222 Skill

Generate jigsaw puzzles via generate_puzzle() or geom_puzzle_*() with parameter validation against inst/config.yml. Supports rectangular, hexagonal, concentric, voronoi, and snic puzzle types with configurable grid, size, seed, offset, and layout parameters. Use when creating puzzle SVG files for a specific type and configuration, testing generation with different parameters, generating sample output for documentation or demos, or creating ggplot2 puzzle visualizations.

pjt222 Skill

Conduct a peer review of research methodology, experimental design, and manuscript quality. Covers methodology evaluation, statistical appropriateness, reproducibility assessment, bias identification, and constructive feedback. Use when reviewing a manuscript, preprint, or internal research report, evaluating a research proposal or study protocol, assessing evidence quality behind a claim, or reviewing a thesis chapter or dissertation section.

pjt222 Skill

Guide a person in systematic observation of systems, patterns, or phenomena. AI coaches neutral attention, field notes methodology, pattern recognition, hypothesis formation, and structured reporting for debugging, research, and system understanding. Use when a person wants to understand a system's behavior before intervening, when someone keeps jumping to conclusions and needs the discipline of observation first, when preparing an evidence-based report, or when studying team dynamics or process effectiveness through direct observation.

pjt222 Skill

Generate jigsaw puzzles via generate_puzzle() or geom_puzzle_*() with parameter validation against inst/config.yml. Supports rectangular, hexagonal, concentric, voronoi, and snic puzzle types with configurable grid, size, seed, offset, and layout parameters. Use when creating puzzle SVG files for a specific type and configuration, testing generation with different parameters, generating sample output for documentation or demos, or creating ggplot2 puzzle visualizations.

pjt222 Skill

Conduct peer review of research methodology, experimental design, manuscript quality. Covers methodology evaluation, statistical appropriateness, reproducibility assessment, bias identification, constructive feedback. Use when reviewing manuscript, preprint, or internal research report; evaluating research proposal or study protocol; assessing evidence quality behind a claim; or reviewing thesis chapter or dissertation section.

pjt222 Skill

Find and fix broken internal links, dead external URLs, stale imports, missing cross-references, and orphaned files. Ensures all project references remain valid and up-to-date. Use when documentation contains broken internal links, external URLs return 404 errors, import statements reference moved or deleted modules, cross-references between files are out of sync, or files exist but are never referenced anywhere in the project.

pjt222 Skill

Find and fix broken internal links, dead external URLs, stale imports, missing cross-references, and orphaned files. Ensures all project references remain valid and up-to-date. Use when documentation contains broken internal links, external URLs return 404 errors, import statements reference moved or deleted modules, cross-references between files are out of sync, or files exist but are never referenced anywhere in the project.

pjt222 Skill

Generate jigsaw puzzles via generate_puzzle() or geom_puzzle_*() with parameter validation against inst/config.yml. Supports rectangular, hexagonal, concentric, voronoi, and snic puzzle types with configurable grid, size, seed, offset, and layout parameters. Use when creating puzzle SVG files for a specific type and configuration, testing generation with different parameters, generating sample output for documentation or demos, or creating ggplot2 puzzle visualizations.

pjt222 Skill

Conduct a peer review of research methodology, experimental design, and manuscript quality. Covers methodology evaluation, statistical appropriateness, reproducibility assessment, bias identification, and constructive feedback. Use when reviewing a manuscript, preprint, or internal research report, evaluating a research proposal or study protocol, assessing evidence quality behind a claim, or reviewing a thesis chapter or dissertation section.

pjt222 Skill

Compute and analyze gematria (Hebrew numerical values) using standard, ordinal, and reduced methods. Covers word-to-number conversion, isopsephy comparisons, and interpretive frameworks. Use when computing the numerical value of a Hebrew word or phrase, comparing two words for shared gematria values, studying a biblical verse or divine name for numerical correspondences, or connecting a numerical result to its position on the Tree of Life.

pjt222 Skill

Remove dead code, unused imports, fix lint warnings, and normalize formatting across a codebase without changing business logic or architecture. Use when lint warnings have piled up during rapid development, unused imports and variables clutter files, dead code paths were never removed, formatting is inconsistent, or static analysis tools report fixable hygiene issues.

pjt222 Skill

Guide a person through structured learning of a new topic, technology, or skill. AI acts as learning coach — assessing current knowledge, designing a learning path, walking through material, testing understanding, adapting difficulty, and planning review sessions for retention. Use when a person wants to learn a new technology and does not know where to start, when someone feels overwhelmed by documentation, when a person keeps forgetting material and needs spaced repetition, or when transitioning between domains and needing a gap analysis.

pjt222 Skill

Guide a person in becoming a better teacher and explainer. AI coaches content structuring, audience calibration, explanation clarity, Socratic questioning technique, feedback interpretation, and reflective practice for technical presentations, documentation, and mentoring. Use when a person needs to present technical content and wants preparation coaching, wants to write better documentation or tutorials, struggles to explain concepts across expertise levels, is mentoring a colleague, or is preparing for a talk or knowledge-sharing session.

pjt222 Skill

Create R package vignettes using R Markdown or Quarto. Covers vignette setup, YAML configuration, code chunk options, building and testing, and CRAN requirements for vignettes. Use when adding a Getting Started tutorial, documenting complex workflows spanning multiple functions, creating domain-specific guides, or when CRAN submission requires user-facing documentation beyond function help pages.

pjt222 Skill

Generate jigsaw puzzles via generate_puzzle() or geom_puzzle_*() with parameter validation against inst/config.yml. Supports rectangular, hexagonal, concentric, voronoi, and snic puzzle types with configurable grid, size, seed, offset, and layout parameters. Use when creating puzzle SVG files for a specific type and configuration, testing generation with different parameters, generating sample output for documentation or demos, or creating ggplot2 puzzle visualizations.

pjt222 Skill

Conduct a peer review of research methodology, experimental design, and manuscript quality. Covers methodology evaluation, statistical appropriateness, reproducibility assessment, bias identification, and constructive feedback. Use when reviewing a manuscript, preprint, or internal research report, evaluating a research proposal or study protocol, assessing evidence quality behind a claim, or reviewing a thesis chapter or dissertation section.

pjt222 Skill

Compute and analyze gematria (Hebrew numerical values) using standard, ordinal, and reduced methods. Covers word-to-number conversion, isopsephy comparisons, and interpretive frameworks. Use when computing the numerical value of a Hebrew word or phrase, comparing two words for shared gematria values, studying a biblical verse or divine name for numerical correspondences, or connecting a numerical result to its position on the Tree of Life.

pjt222 Skill

Remove dead code, unused imports, fix lint warnings, and normalize formatting across a codebase without changing business logic or architecture. Use when lint warnings have piled up during rapid development, unused imports and variables clutter files, dead code paths were never removed, formatting is inconsistent, or static analysis tools report fixable hygiene issues.

pjt222 Skill

Create R package vignettes using R Markdown or Quarto. Covers vignette setup, YAML configuration, code chunk options, building and testing, and CRAN requirements for vignettes. Use when adding a Getting Started tutorial, documenting complex workflows spanning multiple functions, creating domain-specific guides, or when CRAN submission requires user-facing documentation beyond function help pages.

pjt222 Skill

putiorワークフローデータからテーマ付きMermaidフローチャート図を生成する。 テーマ選択（色覚安全4種を含む9テーマ）、出力モード（コンソール、ファイル、 クリップボード、生文字列）、インタラクティブ機能（クリック可能なノード、 ソース情報）、README・Quarto・R Markdownへの埋め込みを網羅する。 ソースファイルのアノテーション後に視覚的な図を生成する準備ができた時、 ワークフロー変更後に図を再生成する時、または異なるオーディエンスのために テーマや出力形式を切り替える時に使用する。

pjt222 Skill

Format citations across academic styles (APA 7, Chicago, Vancouver, IEEE) using CSL processors and R tooling. Convert between citation styles, generate in-text citations and reference lists, and validate formatting against style guides using citeproc, knitcitations, and Quarto's built-in citation engine. Use when rendering a Quarto or R Markdown document with formatted citations, converting a bibliography between citation styles, generating a standalone reference list, or setting up citation infrastructure for a multi-document project.

pjt222 Skill

Guide a person in systematic observation of systems, patterns, or phenomena. AI coaches neutral attention, field notes methodology, pattern recognition, hypothesis formation, and structured reporting for debugging, research, and system understanding. Use when a person wants to understand a system's behavior before intervening, when someone keeps jumping to conclusions and needs the discipline of observation first, when preparing an evidence-based report, or when studying team dynamics or process effectiveness through direct observation.