Integrations & APIs
Integration agent skills teach AI agents to work with specific external services and APIs: third-party platforms, webhooks, MCP servers, and data syncs. Instead of re-explaining an API every session, install the skill and the agent knows the endpoints and conventions.
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holobiomicslab Skill High Resolution Spot To Spot IntegrationUse when you have two spatial omics datasets (e.g., spatial transcriptome and metabolome spot matrices) collected from the same or adjacent tissue sections, with both feature matrices (X: np.ndarray) and spatial coordinates (D: np.ndarray containing location information in .
Audited - holobiomicslab Skill M Z And Retention Time Window Validation
Use when before committing to full-scale targeted peak integration across all LC–MS runs in a metabolomics or lipidomics study. Apply this skill when you have a curated list of 5–50+ target compounds with theoretical m/z values and expected retention times, centroided .
Audited - holobiomicslab Skill Transcript Quantification Integration
Use when you have transcript quantification output (TPM or raw counts) from a pseudo-aligner (Salmon or kallisto) and an ioe/ioi event definition file from SUPPA2's generateEvents step, and you need to calculate PSI values—the relative inclusion level of alternative splicing events—across multiple.
Audited - holobiomicslab Skill Feature Table Integration And Normalization
Use when when you have MS1 feature tables from heterogeneous sources—e.g., XCMS peak detection output mixed with vendor software (MS-DIAL, MZmine2) results—and need to merge them into a single, format-normalized table for ISFrag analysis.
Audited - holobiomicslab Skill Metabolite Annotation Taxonomic Integration
Use when you have paired metabolomics data (MS/MS spectra and feature quantification) linked to organismal or tissue taxonomy, and you want to reduce false positive annotations and improve annotation rank by filtering candidate metabolites to those chemically plausible within the given taxon.
Audited - holobiomicslab Skill Metabolite Structure Annotation Integration
Use when you have a set of candidate transformed structures generated by biotransformation rules (e.
Audited - holobiomicslab Skill Metabolomics Feature Integration Assessment
Use when after XCMS peak picking and fillPeaks() when you have xcmsEIC and filled xcmsSet objects and need to systematically flag low-quality or unreliable peak integrations prior to statistical modeling or machine learning classification.
Audited -
diegosouzapw Bundle Testing QA V2Testing/QA Workflow Bundle workflow skill. Use this skill when the user needs Comprehensive testing and QA workflow covering unit testing, integration testing, E2E testing, browser automation, and quality assurance and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Claude Monitor
Claude Monitor — Diagnóstico de Performance workflow skill. Use this skill when the user needs Monitor de performance do Claude Code e sistema local. Diagnostica lentidao, mede CPU/RAM/disco, verifica API latency e gera relatorios de saude do sistema and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Trigger Dev V2
Trigger.dev Integration workflow skill. Use this skill when the user needs Trigger.dev expert for background jobs, AI workflows, and reliable and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle API Patterns V2
API Patterns workflow skill. Use this skill when the user needs API design principles and decision-making. REST vs GraphQL vs tRPC selection, response formats, versioning, pagination and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle API Patterns V3
API Patterns workflow skill. Use this skill when the user needs API design principles and decision-making. REST vs GraphQL vs tRPC selection, response formats, versioning, pagination and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Comfyui Gateway
ComfyUI Gateway workflow skill. Use this skill when the user needs REST API gateway for ComfyUI servers. Workflow management, job queuing, webhooks, caching, auth, rate limiting, and image delivery (URL + base64) and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Fastapi Templates V2
FastAPI Project Templates workflow skill. Use this skill when the user needs Create production-ready FastAPI projects with async patterns, dependency injection, and comprehensive error handling. Use when building new FastAPI applications or setting up backend API projects and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Fastapi Templates V3
FastAPI Project Templates workflow skill. Use this skill when the user needs Create production-ready FastAPI projects with async patterns, dependency injection, and comprehensive error handling. Use when building new FastAPI applications or setting up backend API projects and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Fp Taskeither Ref V2
TaskEither Quick Reference workflow skill. Use this skill when the user needs Quick reference for TaskEither. Use when user needs async error handling, API calls, or Promise-based operations that can fail and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Odoo Automated Tests
Odoo Automated Tests workflow skill. Use this skill when the user needs Write and run Odoo automated tests using TransactionCase, HttpCase, and browser tour tests. Covers test data setup, mocking, and CI integration and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Slack Bot Builder V2
Slack Bot Builder workflow skill. Use this skill when the user needs Build Slack apps using the Bolt framework across Python, and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Unsplash Integration
Unsplash Integration Skill workflow skill. Use this skill when the user needs Integration skill for searching and fetching high-quality, free-to-use professional photography from Unsplash and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Hubspot Integration V2
HubSpot Integration workflow skill. Use this skill when the user needs Expert patterns for HubSpot CRM integration including OAuth and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Hubspot Integration V3
HubSpot Integration workflow skill. Use this skill when the user needs Expert patterns for HubSpot CRM integration including OAuth and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Hubspot Integration V4
HubSpot Integration workflow skill. Use this skill when the user needs Expert patterns for HubSpot CRM integration including OAuth and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Payment Integration V2
payment-integration workflow skill. Use this skill when the user needs Integrate Stripe, PayPal, and payment processors. Handles checkout flows, subscriptions, webhooks, and PCI compliance. Use PROACTIVELY when implementing payments, billing, or subscription features and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Shopify Development V2
Shopify Development Skill workflow skill. Use this skill when the user needs Build Shopify apps, extensions, themes using GraphQL Admin API, Shopify CLI, Polaris UI, and Liquid and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Hugging Face Tool Builder
Hugging Face API Tool Builder workflow skill. Use this skill when the user needs Your purpose is now is to create reusable command line scripts and utilities for using the Hugging Face API, allowing chaining, piping and intermediate processing where helpful. You can access the API directly, as well as use the hf command line tool and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Robius Matrix Integration
Robius Matrix SDK Integration Skill workflow skill. Use this skill when the user needs | and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Robius Matrix Integration V2
Robius Matrix SDK Integration Skill workflow skill. Use this skill when the user needs | and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Bdistill Knowledge Extraction
Knowledge Extraction workflow skill. Use this skill when the user needs Extract structured domain knowledge from AI models in-session or from local open-source models via Ollama. No API key needed and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Python Fastapi Development V2
Python/FastAPI Development Workflow workflow skill. Use this skill when the user needs Python FastAPI backend development with async patterns, SQLAlchemy, Pydantic, authentication, and production API patterns and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Bdistill Knowledge Extraction V2
Knowledge Extraction workflow skill. Use this skill when the user needs Extract structured domain knowledge from AI models in-session or from local open-source models via Ollama. No API key needed and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle N8n Expression Syntax
n8n Expression Syntax workflow skill. Use this skill when the user needs Validate n8n expression syntax and fix common errors. Use when writing n8n expressions, using {{}} syntax, accessing $json/$node variables, troubleshooting expression errors, or working with webhook data in workflows and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Odoo Migration Helper
Odoo Migration Helper workflow skill. Use this skill when the user needs Step-by-step guide for migrating Odoo custom modules between versions (v14→v15→v16→v17). Covers API changes, deprecated methods, and view migration and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Paypal Integration V2
PayPal Integration workflow skill. Use this skill when the user needs Master PayPal payment integration including Express Checkout, IPN handling, recurring billing, and refund workflows and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Paypal Integration V3
PayPal Integration workflow skill. Use this skill when the user needs Master PayPal payment integration including Express Checkout, IPN handling, recurring billing, and refund workflows and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Stripe Integration V2
Stripe Integration workflow skill. Use this skill when the user needs Master Stripe payment processing integration for robust, PCI-compliant payment flows including checkout, subscriptions, webhooks, and refunds and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
54 - diegosouzapw Bundle Stripe Integration V3
Stripe Integration workflow skill. Use this skill when the user needs Master Stripe payment processing integration for robust, PCI-compliant payment flows including checkout, subscriptions, webhooks, and refunds and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.
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Frequently asked questions
What are Integrations & APIs agent skills?
Integration agent skills teach AI agents to work with specific external services and APIs: third-party platforms, webhooks, MCP servers, and data syncs. Instead of re-explaining an API every session, install the skill and the agent knows the endpoints and conventions.
Which Integrations & APIs skills are most installed?
Popular Integrations & APIs skills on SkillMD right now include high-resolution-spot-to-spot-integration, m-z-and-retention-time-window-validation, transcript-quantification-integration. Rankings shift as installs change; sort this page by "Most installs" for the live list.
Do Integrations & APIs skills work with Claude Code and Cursor?
Yes. Every skill here ships as a SKILL.md file, an open format that works in Claude Code, Claude.ai, Cursor, Codex, Windsurf, and 60+ other agents. Install one with npx skillmds@latest add <owner>/<name>, or copy the file into your agent's skills directory.