Research & Search
Research agent skills teach AI agents to gather and synthesize information properly: literature reviews, competitive analysis, web research with citations, and structured summaries. Each SKILL.md encodes a method, not just a prompt, so results stay consistent across runs.
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gabrielmoreira Skill Research ScoutMines academic papers, research blogs, and curator newsletters for stealable methods and frameworks. Use when scanning research for applicable techniques across AI/ML/SWE.
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gabrielmoreira Skill Embodiment DescriptionWrite detailed embodiment descriptions for patent specifications. Use when user says "撰写实施例", "write embodiment", "实施例描述", "detailed description", or wants to describe how to practice an invention.
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gabrielmoreira Skill Writing Systems PapersParagraph-level structural blueprint for 10-12 page systems papers targeting OSDI, SOSP, ASPLOS, NSDI, and EuroSys. Provides page allocation, paragraph templates, and writing patterns. Use when user says "写系统论文", "systems paper structure", "OSDI paper", "SOSP paper", or wants fine-grained structural guidance for a systems conference submission.
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gabrielmoreira Skill Encori APIAccess ENCORI (StarBase) database for miRNA-target, RNA-RNA, and other regulatory data. Invoke when user asks to search ENCORI or retrieve regulatory interactions.
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gabrielmoreira Skill Jaspar APIAccess JASPAR database for transcription factor binding profiles (matrices), collections, and species via REST API. Use when user wants to search for transcription factors, retrieve matrix details (PFM/PWM), infer profiles from protein sequences, or explore JASPAR collections.
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gabrielmoreira Skill API Design PrinciplesPrinciples and checklists for designing and reviewing REST and GraphQL APIs; use when defining or evaluating API contracts (endpoints/schemas), naming, error models, pagination, versioning, and REST vs. GraphQL trade-offs.
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gabrielmoreira Skill Knowledge Base SearchSearch and locate relevant content within a local knowledge base (files, indices, or PageIndex). Use when you need verifiable citations (file + page/paragraph) to support answers from local sources.
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gabrielmoreira Skill Lab Prep CalculationsPerform pre-experiment calculations and generate step-by-step preparation protocols for dilutions, solution preparation, dissolution, and % concentrations when planning formulations and lab prep workflows.
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gabrielmoreira Skill Literature ManagementImport local literature into a managed library; trigger when you need offline deduplication, tagging, and a searchable index.
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gabrielmoreira Skill Literature StatisticsGenerate statistics for publication-year and journal distributions from local references or PDFs; use when you need standardized Year/Journal tables and a summary without any network access.
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gabrielmoreira Bundle Bio Causal Genomics Pleiotropy DetectionDetect and adjust for horizontal pleiotropy in two-sample Mendelian randomization by distinguishing uncorrelated (UHP) from correlated (CHP) pleiotropy and choosing among Egger, MR-PRESSO, MR-RAPS, CAUSE, LHC-MR, LCV, MR-Clust, MR-Mix, and contamination-mixture methods. Use when validating an MR causal claim, running the STROBE-MR sensitivity battery, suspecting a shared heritable confounder, working under weak-instrument or polygenic-exposure regimes, or reconciling discordant estimates across robust methods.
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gabrielmoreira Bundle Eccc Jeanne SulzerVerification-first methodology for the ECCC (Khmer Rouge Tribunal). Every citation is verified against eccc.gov.kh, the ECCC archive or legal-tools.org. Covers Case File numbering, the 001/002/002-01/002-02 structure, the genocide findings against the Cham and the Vietnamese, and the Internal Rules revision discipline. Research aid, not legal advice. Part of the open-source "Skills for International Justice" library — methodology: github.com/jeannesulzer/international-criminal-tribunals-skills
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gabrielmoreira Bundle Nuremberg Tokyo Jeanne SulzerVerification-first methodology for the post-WWII tribunals: the IMT at Nuremberg, the twelve Nuremberg Military Tribunals, and the IMTFE at Tokyo. Citations are verified against the official records (Blue/Green Series, Pritchard-Zaide) and the digital archives (Avalon, Harvard NTP, UVA IMTFE). Guards the four classic traps (IMT vs NMT; Nuremberg vs Tokyo; Charter article numbers; majority judgment vs separate opinions, e.g. the Pal dissent). Research aid, not legal advice. Part of the open-source "Skills for International Justice" library — methodology: github.com/jeannesulzer/international-criminal-tribunals-skills
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gabrielmoreira Skill GseaRun GSEA on a ranked gene list and produce the enrichment table, running-score table, and enrichment plots.
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gabrielmoreira Skill Pyopenms SkillComprehensive tool for computational mass spectrometry using PyOpenMS; use when you need to read/write MS formats (mzML/mzXML/MGF), run signal processing (smoothing/peak picking), detect isotope features, or perform peptide identification in proteomics/metabolomics workflows.
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gabrielmoreira Skill Openalex DBAccess the OpenAlex database (240M+ scholarly works) for bibliometric analysis, literature search, and citation tracking; use when you need to query works/authors/institutions/concepts without an API key.
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gabrielmoreira Skill Medical Unit ConverterConvert medical laboratory values between units (mg/dL to mmol/L, etc.) with formula transparency and clinical reference ranges. Supports glucose, cholesterol, creatinine, and hemoglobin conversions.
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gabrielmoreira Skill Symptom Checker TriageSuggest triage levels (Emergency, Urgent, Outpatient) based on red flag symptoms using a rule-based engine. For AI-assisted decision support only — not a substitute for professional medical diagnosis.
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gabrielmoreira Bundle Medical Imaging ReviewWrite comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on topics like segmentation, detection, classification in CT, MRI, X-ray, ultrasound, or pathology imaging. Triggers on requests for "review paper", "survey", "literature review", "综述", "systematic review", or mentions of writing academic reviews on deep learning for medical imaging.
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gabrielmoreira Bundle Ksc Jeanne SulzerVerification-first methodology for the Kosovo Specialist Chambers and Specialist Prosecutor's Office (The Hague, applying Kosovo law). Citations are verified against scp-ks.org before use; appeal registry numbers are cited only once confirmed. Covers Thaçi et al., Mustafa, Pjetër Shala and Gucati & Haradinaj. Research aid, not legal advice. Part of the open-source "Skills for International Justice" library — methodology: github.com/jeannesulzer/international-criminal-tribunals-skills
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gabrielmoreira Bundle Special Panels Timor Leste Jeanne SulzerVerification-first methodology for the Special Panels for Serious Crimes of the Dili District Court (UNTAET, 2000–2006). Citations are verified against JSMP, the UN archives and legal-tools.org. Covers the Los Palos case, the Serious Crimes Unit caseload (391 indicted; about 88 tried) and the SPSC-vs-Jakarta distinction. Research aid, not legal advice. Part of the open-source "Skills for International Justice" library — methodology: github.com/jeannesulzer/international-criminal-tribunals-skills
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gabrielmoreira Bundle Reg 64 Kosovo Jeanne SulzerVerification-first methodology for the UNMIK Regulation 64 Panels of the Kosovo district courts (2000–2008). Citations are verified against UNMIK/EULEX archives and legal-tools.org. Keeps the Reg. 64 Panels distinct from the Kosovo Specialist Chambers, and clarifies that Reg. 2000/64 permitted (did not impose) internationally-majority panels. Research aid, not legal advice. Part of the open-source "Skills for International Justice" library — methodology: github.com/jeannesulzer/international-criminal-tribunals-skills
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gabrielmoreira Skill AI Deep ResearchBuilds repeatable deep-research workflows for verified synthesis. Use when producing evidence-backed briefs, comparisons, dossiers, or research pipelines.
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gabrielmoreira Skill Scientific Writing GuideCurated tools and techniques for scientific writing beyond LaTeX
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gabrielmoreira Skill Biopython PhyloUse Bio.Phylo to read/write phylogenetic trees and perform visualization and statistics; use when tree parsing/conversion, pruning/rerooting, distance calculation, or plotting is required.
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gabrielmoreira Skill Alphafold DBAccess over 200M protein structures from AlphaFold DB; use when you need to retrieve predicted 3D structures (PDB/mmCIF), confidence metrics (pLDDT/PAE), or protein metadata by UniProt accession.
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gabrielmoreira Skill Chemical Storage SorterSort laboratory chemicals into safe storage groups by hazard classification (acids, bases, oxidizers, flammables, toxics). Identifies incompatible pairs, generates storage plans with warnings, and supports OSHA/NFPA compliance for lab safety.
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gabrielmoreira Skill Lab Inventory PredictorPredict depletion time of critical lab reagents based on historical usage frequency, and automatically generate purchase alerts when stock falls below safety thresholds.
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gabrielmoreira Bundle Mediation Problem GeneratorCreate original, competition-ready commercial mediation problems and confidential packets with iterative validation. Use when a user provides a topic, industry, dispute sketch, or existing general-information packet and wants a public packet plus confidential packets for both sides—or one named side. Build a narrow but workable settlement corridor; verify factual and numerical consistency, information asymmetry, balance, originality, and commercial feasibility; and revise until deterministic and semantic exit criteria pass. Do not use merely to summarize an existing packet or to advise parties in a real dispute. Requires local file access; Python 3 is recommended for bundled deterministic checks, with disclosed manual fallbacks when unavailable.
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gabrielmoreira Skill Gokegg AnalysisUse when performing GO and KEGG enrichment on a gene list from bulk RNA-seq or microarray studies, then generating a combined GO/KEGG dot chart. NOT for single-cell RNA-seq, methylation data, or non-expression data.
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gabrielmoreira Skill Tone AdjusterUse when converting medical text between academic and patient-friendly tones, translating medical jargon for patients, adapting research papers for public audiences, or rewriting clinical notes for patient handouts. Maintains medical accuracy while adjusting readability level.
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gabrielmoreira Skill Smiles De SalterAnalyze data with `smiles-de-salter` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.
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gabrielmoreira Skill Key TakeawaysExtracts and summarizes key takeaways from documents, meeting notes, articles, and other text content. Use when the user asks for summaries, bullet points, main points, highlights, or a TL;DR of any document or body of text. Produces structured outputs such as numbered lists, executive summaries, and action items. Supports configurable output formats including JSON export for downstream use.
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gabrielmoreira Skill Virtual Patient RoleplaySimulate standardized patient encounters for medical training, supporting OSCE-style history-taking practice, communication skills rehearsal, and educational debriefing.
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gabrielmoreira Skill Paper Writing WorkflowWorkflow phases for paper-writing tasks: triage, material inventory, research question, literature review, paper outline, data analysis summary, figure storyline, reader testing, and finalize packet. Each phase is a short contract — read the relevant rows for the current task only.
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gabrielmoreira Skill Calendar To WorkflowConverts calendar events and schedules into Claude Code workflows, meeting prep documents, and standup notes. Use when the user mentions calendar events, meeting prep, standup generation, or scheduling workflows. Trigger with phrases like "prep for my meetings", "generate standup notes", "create workflow from calendar", or "summarize today's schedule".
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Frequently asked questions
What are Research & Search agent skills?
Research agent skills teach AI agents to gather and synthesize information properly: literature reviews, competitive analysis, web research with citations, and structured summaries. Each SKILL.md encodes a method, not just a prompt, so results stay consistent across runs.
Which Research & Search skills are most installed?
Popular Research & Search skills on SkillMD right now include research-scout, embodiment-description, writing-systems-papers. Rankings shift as installs change; sort this page by "Most installs" for the live list.
Do Research & Search skills work with Claude Code and Cursor?
Yes. Every skill here ships as a SKILL.md file, an open format that works in Claude Code, Claude.ai, Cursor, Codex, Windsurf, and 60+ other agents. Install one with npx skillmds@latest add <owner>/<name>, or copy the file into your agent's skills directory.