Web & Frontend

holobiomicslab Skill

Use when you have a GNPS GraphML molecular network and need to isolate cohesive subsets of spectra (components) before analyzing which fragmentation patterns explain them.

pjt222 Skill

Deploy a self-hosted SearXNG meta search engine via Docker Compose. Covers settings.yml configuration, engine selection, result proxying, Nginx frontend, persistence, and updates. Use when setting up a private search engine without tracking, aggregating results from multiple providers, running a shared search instance for a team or organisation, or replacing reliance on a single search provider.

holobiomicslab Skill

Use when you have a preprocessed GC-MS dataset (from spreadOut) with standardized column names (Compound.Name, Component.RT, Base.Peak.MZ, Component.Area, Match.Factor) and a specific list of chemical compounds you want to extract and aggregate across multiple sample runs.

holobiomicslab Skill

Use when you have completed independent batch searches across one or more domain-specific MASST tools (microbeMASST, plantMASST, tissueMASST, microbiomeMASST, foodMASST) and received multiple separate output files (_microbe.html, _plant.json, _matches.tsv, _library.tsv, _datasets.tsv, _count_domain.

holobiomicslab Skill

Use when you need to run a web application locally (by opening index.html directly in the browser) and the application uses WebWorker or WebAssembly modules that fail to load with cross-origin policy or file-access errors.

holobiomicslab Skill

Use when you have a GC-MS dataset in CSV format with retention times, base peak m/z values, component areas, and compound names, and you need to identify whether specific query chemicals are present in your samples and retrieve their -match factors (scoring the confidence of the spectral match) and.

holobiomicslab Skill

Use when when reconstructing or validating the ColumnFinder component in mwtab, you need to assess whether the combined NameMatcher.dict_match and ValueMatcher.series_match operations are correctly populating database-ID columns. Apply this skill after defining NameMatcher patterns (e.

holobiomicslab Skill

Use when you have raw GC-MS output from Agilent Unknowns Analysis (a .CSV with columns Component.RT, Base.Peak.MZ, Component.Area, Compound.Name, Match.Factor, File.

pjt222 Skill

Diseñar interfaces de usuario de aplicaciones Shiny usando bslib para temas, layout_columns para cuadrículas responsivas, cajas de valor, tarjetas y CSS/SCSS personalizado. Cubre layouts de página, accesibilidad y coherencia de marca. Úsalo al construir una nueva UI de app Shiny desde cero, al modernizar una app existente de fluidPage a bslib, al aplicar temas de marca, al hacer una app Shiny responsiva en diferentes tamaños de pantalla, o al mejorar la accesibilidad de una aplicación Shiny.

pjt222 Skill

テーマ設定にbslib、レスポンシブグリッドにlayout_columns、バリューボックス、 カード、カスタムCSS/SCSSを使ってShinyアプリケーションUIを設計します。 ページレイアウト、アクセシビリティ、ブランドの一貫性を扱います。新しいShinyアプリ UIをゼロから構築するとき、既存のアプリをfluidPageからbslibにモダナイズするとき、 ブランドのテーマを適用するとき、Shinyアプリを様々な画面サイズでレスポンシブにするとき、 またはShinyアプリのアクセシビリティを改善するときに使用します。

holobiomicslab Skill

Use when you have raw GC-MS data in netCDF or vendor-specific binary format and need to separate co-eluting compounds and extract clean mass spectra for each individual chemical component prior to molecular networking, spectral matching, or metabolite identification workflows.

pjt222 Skill

Desplegar una aplicación Next.js en Vercel. Cubre la vinculación del proyecto, variables de entorno, despliegues de vista previa, dominios personalizados y configuración del despliegue en producción. Úsalo al desplegar una aplicación Next.js por primera vez, al configurar despliegues de vista previa para pull requests, al configurar dominios personalizados, o al gestionar variables de entorno en un despliegue de Vercel en producción.

pjt222 Skill

Create production-ready Helm charts for Kubernetes application deployment with templating, values management, chart dependencies, hooks, and testing. Covers chart structure, Go template syntax, values.yaml design, chart repositories, versioning, and best practices for maintainable and reusable charts. Use when packaging a Kubernetes application for repeatable deployments, parameterizing manifests for multiple environments, managing complex multi-component applications with dependencies, or standardizing deployment practices with versioned rollback capability across teams.

pjt222 Skill

Next.jsアプリケーションをVercelにデプロイします。プロジェクトのリンク、 環境変数、プレビューデプロイメント、カスタムドメイン、本番デプロイメントの 設定を扱います。Next.jsアプリを初めてデプロイするとき、プルリクエスト用の プレビューデプロイメントをセットアップするとき、カスタムドメインを設定するとき、 またはVercel本番デプロイメントの環境変数を管理するときに使用します。

pjt222 Skill

Create production-ready Helm charts for Kubernetes application deployment with templating, values management, chart dependencies, hooks, and testing. Covers chart structure, Go template syntax, values.yaml design, chart repositories, versioning, and best practices for maintainable and reusable charts. Use when packaging a Kubernetes application for repeatable deployments, parameterizing manifests for multiple environments, managing complex multi-component applications with dependencies, or standardizing deployment practices with versioned rollback capability across teams.

pjt222 Skill

Review user experience and interface design using Nielsen's heuristics, WCAG 2.1 accessibility guidelines, keyboard and screen reader audit, user flow analysis, cognitive load assessment, and form usability evaluation. Use when conducting a usability review before release, assessing WCAG 2.1 accessibility compliance, evaluating user flows for efficiency, reviewing form design, or performing a heuristic evaluation of an existing interface.

pjt222 Skill

Review user experience and interface design using Nielsen's heuristics, WCAG 2.1 accessibility guidelines, keyboard and screen reader audit, user flow analysis, cognitive load assessment, and form usability evaluation. Use when conducting a usability review before release, assessing WCAG 2.1 accessibility compliance, evaluating user flows for efficiency, reviewing form design, or performing a heuristic evaluation of an existing interface.

pjt222 Skill

Crear un documento Quarto para informes reproducibles, presentaciones o sitios web. Cubre configuración YAML, opciones de bloques de código, formatos de salida, referencias cruzadas y renderizado. Usar al crear un informe de análisis reproducible, construir una presentación con código integrado, generar documentos HTML, PDF o Word desde código, o migrar un documento R Markdown existente a Quarto.

pjt222 Skill

Generate a Quarto-based tour report with embedded maps, daily itineraries, logistics tables, and accommodation/transport details. Produces a self-contained HTML or PDF document suitable for offline use during travel. Use when compiling a planned tour into a shareable document, creating an offline-accessible travel guide, documenting a completed trip with photos and statistics, or producing a professional tour proposal for a group or client.

pjt222 Skill

再現可能なレポート、プレゼンテーション、ウェブサイト用のQuartoドキュメントを作成する。 YAML設定、コードチャンクオプション、出力形式、相互参照、レンダリングをカバー。 再現可能な分析レポートの作成、コード埋め込みプレゼンテーションの構築、 コードからHTML・PDF・Word文書の生成、既存のR MarkdownドキュメントのQuartoへの 移行に使用する。

pjt222 Skill

埋め込みマップ、日別旅程、ロジスティクス表、宿泊・交通の詳細を含むQuartoベースの 旅行レポートを生成する。旅行中のオフライン使用に適した自己完結型のHTMLまたはPDF ドキュメントを生成する。計画した旅程を共有可能なドキュメントにまとめる時、 オフラインアクセス可能な旅行ガイドを作成する時、写真と統計を含む完了した旅行を 記録する時、またはグループやクライアント向けのプロフェッショナルな旅行提案を 作成する時に使用する。

pjt222 Skill

Deploy a Next.js application to Vercel. Covers project linking, environment variables, preview deployments, custom domains, and production deployment configuration. Use when deploying a Next.js app for the first time, setting up preview deployments for pull requests, configuring custom domains, or managing environment variables in a production Vercel deployment.

pjt222 Skill

Create production-ready Helm charts for Kubernetes application deployment with templating, values management, chart dependencies, hooks, and testing. Covers chart structure, Go template syntax, values.yaml design, chart repositories, versioning, and best practices for maintainable and reusable charts. Use when packaging a Kubernetes application for repeatable deployments, parameterizing manifests for multiple environments, managing complex multi-component applications with dependencies, or standardizing deployment practices with versioned rollback capability across teams.

pjt222 Skill

Deploy a Next.js application to Vercel. Covers project linking, environment variables, preview deployments, custom domains, and production deployment configuration. Use when deploying a Next.js app for the first time, setting up preview deployments for pull requests, configuring custom domains, or managing environment variables in a production Vercel deployment.

pjt222 Skill

搭建新的 Next.js 应用程序，使用 App Router、TypeScript 及现代默认配置。 涵盖项目创建、目录结构、路由设置及初始配置。适用于启动新的 Web 应用 项目、创建支持服务端渲染的 React 前端、构建带 API 路由的全栈应用， 或从零搭建 TypeScript Web 项目。

pjt222 Skill

Build reusable Shiny modules with proper namespace isolation using NS(). Covers module UI/server pairs, reactive return values, inter-module communication, and nested module composition. Use when extracting a reusable component from a growing Shiny app, building a UI widget used in multiple places, encapsulating complex reactive logic behind a clean interface, or composing larger applications from smaller, testable units.

pjt222 Skill

Deploy a self-hosted SearXNG meta search engine via Docker Compose. Covers settings.yml configuration, engine selection, result proxying, Nginx frontend, persistence, and updates. Use when setting up a private search engine without tracking, aggregating results from multiple providers, running a shared search instance for a team or organisation, or replacing reliance on a single search provider.

pjt222 Skill

Deploy a self-hosted SearXNG meta search engine via Docker Compose. Covers settings.yml configuration, engine selection, result proxying, Nginx frontend, persistence, and updates. Use when setting up a private search engine without tracking, aggregating results from multiple providers, running a shared search instance for a team or organisation, or replacing reliance on a single search provider.

pjt222 Skill

使用 bslib 进行主题设计、layout_columns 实现响应式网格、值框、卡片及 自定义 CSS/SCSS 设计 Shiny 应用 UI。涵盖页面布局、可访问性和品牌一致性。 适用于从零构建新 Shiny 应用 UI、将现有应用从 fluidPage 升级到 bslib、 应用品牌主题、使 Shiny 应用在不同屏幕尺寸上响应式显示，或改善 Shiny 应用的可访问性。

pjt222 Skill

Deploy a self-hosted SearXNG meta search engine via Docker Compose. Covers settings.yml configuration, engine selection, result proxying, Nginx frontend, persistence, and updates. Use when setting up a private search engine without tracking, aggregating results from multiple providers, running a shared search instance for a team or organisation, or replacing reliance on a single search provider.

pjt222 Skill

Crear una nueva aplicación Next.js con App Router, TypeScript y valores predeterminados modernos. Cubre la creación del proyecto, estructura de directorios, configuración de enrutamiento y configuración inicial. Úsalo al iniciar un nuevo proyecto de aplicación web, al crear un frontend basado en React con renderizado del lado del servidor, al construir una aplicación full-stack con rutas de API, o al configurar un proyecto web TypeScript desde cero.

pjt222 Skill

Extract data from web pages using the scrapling Python library — select the appropriate fetcher tier (HTTP, stealth Chromium, or full browser automation) based on target site defenses, configure headless browsing, and extract structured data with CSS selectors. Use when WebFetch is insufficient for JS-rendered pages, anti-bot-protected sites, or structured multi-element extraction requiring DOM traversal.

pjt222 Skill

Extract data from web pages using the scrapling Python library — select the appropriate fetcher tier (HTTP, stealth Chromium, or full browser automation) based on target site defenses, configure headless browsing, and extract structured data with CSS selectors. Use when WebFetch is insufficient for JS-rendered pages, anti-bot-protected sites, or structured multi-element extraction requiring DOM traversal.

pjt222 Skill

Review user experience and interface design using Nielsen's heuristics, WCAG 2.1 accessibility guidelines, keyboard and screen reader audit, user flow analysis, cognitive load assessment, and form usability evaluation. Use when conducting a usability review before release, assessing WCAG 2.1 accessibility compliance, evaluating user flows for efficiency, reviewing form design, or performing a heuristic evaluation of an existing interface.

pjt222 Skill

Review UX and UI design with Nielsen heuristics, WCAG 2.1 accessibility, keyboard and screen reader audit, user flow analysis, cognitive load assessment, and form usability. Use for usability review before release, WCAG 2.1 audit, user flow evaluation, form review, or heuristic evaluation of an existing interface.

pjt222 Skill

Scaffold a new Next.js application with App Router, TypeScript, and modern defaults. Covers project creation, directory structure, routing setup, and initial configuration. Use when starting a new web application project, creating a React-based frontend with server-side rendering, building a full-stack application with API routes, or setting up a TypeScript web project from scratch.