Results for “cross-pollination”

Optimizes Qdrant query performance for large limits across multiple shards by using Poisson-distributed subsampling to reduce inter-shard data transfer.

Detect poisoned training data and backdoored models across the ML pipeline using statistical analysis, activation clustering, and spectral signatures.

Perform fast genomic interval operations (overlap, nearest, merge, coverage, cluster, complement, subtract, count-overlaps), multi-format bioinformatics I/O, DataFusion SQL, and pileup on Polars DataFrames via the polars-bio library, serving as a scalable alternative to bioframe and bedtools.

Mathematical AI interpretability with sheaf cohomology, spectral analysis, causal inference, and hallucination prevention

Perform high-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames, including overlap, nearest, merge, coverage, complement, subtract, and reading/writing BED, VCF, BAM, GFF, FASTA, and FASTQ formats with streaming and cloud-native support.

Simulates meiotic recombination to produce offspring genomes from parent pairs, modeling Mendelian segregation, de novo mutation, sex determination, trait inference, and clinical evaluation against a disease registry.

Performs differential expression analysis on bulk RNA-seq or pseudo-bulk count matrices with QC, PCA, and contrast testing.

Automates genome-wide association studies from genotype files to publication-ready results, running PLINK2 QC and REGENIE regression with Manhattan and QQ plots.

Per-group MCP JSON-RPC proxy routing AI tool calls to multiple backend MCP servers with tool group filtering

Agent C3 - Mixed Methods Design Consultant Comprehensive mixed methods research design specialist covering sequential, concurrent, embedded, and multiphase designs with Morse notation. Core Capabilities: - Sequential Explanatory (QUAN → qual): Explain quantitative results - Sequential Exploratory (QUAL → quan): Develop instruments - Convergent Parallel (QUAN + QUAL): Comprehensive understanding - Embedded (QUAN(qual)): Secondary strand addresses different question - Multiphase: Long-term projects with iterative phases - Morse notation interpretation and recommendation

Evaluates computational throughput and real-time efficiency of embedded CPU and GPU platforms by measuring peak FLOPS via a matrix rotation kernel and assessing inference latency and power consumption on a robotic vision pipeline.

Bluesky + X social loop. The bundled notifications poller runs `social-cli sync` on cron (default `*/15`), parses the per-platform `inbox-<platform>.yaml` files, and wakes the agent in batches of up to 3 never-seen notifications per turn. The optional feed poller runs `social-cli feed` every 2h for timeline scanning. Agent reads inbox, writes `outbox-<platform>.yaml`, runs `social-cli dispatch`. Also supports one-shot commands (post/reply/thread/like). Opt-in: install the skill, drop `.env` credentials into `<home>/state/pollers/social-cli-notifications/`. Companion to the `pollers` framework skill and the `world-scanning` skill.

Co-fold biomolecular complexes with Boltz-2, an open AlphaFold3-style model — predict protein + ligand (SMILES/CCD), protein + nucleic-acid, and multi-chain structures in one pass, with binding-affinity prediction. Use when folding a protein together with a small-molecule ligand, predicting a holo (ligand-bound) complex or its binding affinity, or co-folding protein–DNA/RNA assemblies. For protein-only or protein–protein folding without ligands prefer alterlab-alphafold; for antibody–antigen complexes prefer alterlab-chai; to dock a ligand into a FIXED receptor structure prefer alterlab-diffdock; to look up an existing structure prefer alterlab-pdb. Part of the AlterLab Academic Skills suite.