Results for “heim”

Use when you need to characterize score distributions of a profile HMM on random sequences, such as calibration checks, benchmarking, or filter-behavior experiments.

Use when searching protein sequences against profile hidden Markov models (HMMs) such as Pfam or other HMM databases.

Use when sampling synthetic sequences, alignments, or consensus sequences from one or more profile HMMs.

Use when running HMMER master or worker daemon services that front `phmmer`, `hmmsearch`, and `hmmscan` against cached databases.

Use when searching DNA or RNA queries against nucleotide sequence databases with HMMER's nucleotide homology search engine.

Write, read, and validate HUML documents, converting between YAML/JSON/TOML and HUML for human-readable configuration files.

Use when searching one or more protein query sequences against a protein sequence database with HMMER's one-pass sequence-vs-sequence searcher.