Results for “pubchem”

11 skills
More results
alterlab-ieu
alterlab-pubmed
Provide direct REST API access to PubMed via the NCBI E-utilities API, supporting advanced Boolean/MeSH queries, batch processing, and citation management. Use when searching biomedical literature by MeSH terms, retrieving abstracts or PMIDs in bulk, or scripting custom PubMed queries over raw HTTP/REST — for Python workflows prefer biopython (Bio.Entrez) instead, use this for direct REST work or custom API implementations. Part of the AlterLab Academic Skills suite.
60 · bundle
gabrielmoreira
bgpt-mcp
Search scientific papers via the BGPT MCP server and retrieve structured experimental data — methods, results, conclusions, quality scores, and 25+ metadata fields per paper.
17 · bundle
k-dense-ai
citation-management
Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries.
30.2k · bundle
vimalinx
pma2apa
Use when converting `PubmedArticle` XML from EDirect into APA-style citation text or APA-structured XML for downstream parsing.
0 · bundle
k-dense-ai
torchdrug
Build and train graph neural networks for drug discovery, protein modeling, and molecular science using PyTorch-native tools.
30.2k · bundle
vimalinx
cit2pmid
Use when resolving structured citation fields or citation XML into candidate PubMed IDs with EDirect matching modes.
0 · bundle
k-dense-ai
pysam
Read, write, and manipulate genomic datasets including SAM/BAM/CRAM alignments, VCF/BCF variants, and FASTA/FASTQ sequences using a Pythonic interface to htslib.
30.2k · bundle
ahang1598
doubao-academic-polish
学术论文正文写作、结构设计与语言润色总入口。完整起草、续写、扩写、补写或实质性修订各学科的中英文论文正文时,进入paper-write-zh或paper-write-en;只做提纲、结构诊断或重排方案时,进入paper-shape结构模式;只做忠实润色或不新增研究内容的中译英时,进入paper-shape润色模式。研究评价转/doubao-academic-evaluator;独立系统性文献调研转/doubao-literature-research。
9
k-dense-ai
pyopenms
Analyze proteomics and metabolomics mass spectrometry data with PyOpenMS: read/write MS file formats, process spectra, detect and quantify features, identify peptides and proteins, and run end-to-end LC-MS/MS pipelines using ready-to-run scripts.
30.2k · bundle
antigravity
ii-commons
Retrieve deterministic search results, metadata, and full-document Markdown from arXiv, PubMed/PMC, and US policy corpora with daily freshness checks.
42.4k