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CodingKaiser

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• 10 skills
• 0 followers
• 1 week ago last updated

1. ▌
   Shell Scripting · codingkaiser bundle

   Specialized knowledge of Bash and Zsh scripting, shell automation, command-line tools, and scripting best practices. Use when the user needs to write, debug, or optimize shell scripts, work with command-line tools, automate tasks with bash/zsh, or asks for shell script help.
   1 install
2. ▌
   Python Style Guide · codingkaiser bundle

   Comprehensive Python programming guidelines based on Google's Python Style Guide. Use when you needs to write Python code, review Python code for style issues, refactor Python code, or provide Python programming guidance. Covers language rules (imports, exceptions, type annotations), style rules (naming conventions, formatting, docstrings), and best practices for clean, maintainable Python code.
   1 install
3. ▌
   Sequencing Base Masks · codingkaiser

   Sequencing read requirements and bcl2fastq base masks for 10x Genomics libraries: chemistry-specific BasesMaskCR values, ATAC I2 barcode requirement (capital I not lowercase y), Visium FFPE vs frozen R2 length difference.
   1 install
4. ▌
   Bfabricpy · codingkaiser

   Python interface to the B-Fabric laboratory information management system. Use when working with B-Fabric API for CRUD operations on samples, datasets, workunits, resources, or building B-Fabric applications and scripts.
   1 install
5. ▌
   R Single Cell Plotting · codingkaiser

   R plotting conventions for Seurat/scRNA-seq: UMAP square plots (aspect.ratio=1, raster=FALSE), polychrome cluster colors, DimPlot/FeaturePlot settings, saving 300 DPI PNG, volcano plots with EnhancedVolcano, statistical comparisons with rstatix/ggpubr.
   1 install
6. ▌
   R Development · codingkaiser bundle

   Modern R development practices emphasizing tidyverse patterns (dplyr 1.1 and later, native pipe, join_by, .by grouping), rlang metaprogramming, performance optimization, and package development. Use when you needs to write R code, create R packages, optimize R performance, or provide R programming guidance.
   1 install
7. ▌
   Rmd Formatting · codingkaiser

   R Markdown formatting patterns: chunk display strategies (include=FALSE + inline R vs results='asis'), table rendering with knitr::kable, header hierarchy with tabsets, downloadable file embedding, and what to avoid (cat/print in visible chunks).
   1 install
8. ▌
   Pixi Package Manager · codingkaiser bundle

   Fast, reproducible scientific Python environments with pixi - conda and PyPI unified
   1 install
9. ▌
   Marimo Notebook · codingkaiser bundle

   Write a marimo notebook in a Python file in the right format.
   1 install
10. ▌
    Plotly Compact · codingkaiser

    Compact Plotly visualization patterns. Express for quick plots, Graph Objects for control.
    1 install