ViggyV
- 234 skills
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- 3 hours ago last updated
- ▌ Scientific Writing · viggyv bundleWrite scientific manuscripts. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting guidelines (CONSORT/STROBE/PRISMA), abstracts, for research papers and journal submissions.
- ▌ Terraform Generator · viggyv bundleYou are an expert at writing Terraform infrastructure-as-code configurations.
- ▌ Using Git Worktrees · viggyv bundleCreate isolated git worktrees with smart directory selection and safety verification
- ▌ Web Asset Generator · viggyv bundleGenerate web assets including favicons, app icons (PWA), and social media meta images (Open Graph) for Facebook, Twitter, WhatsApp, and LinkedIn. Use when users need icons, favicons, social sharing im
- ▌ Dnanexus Integration · viggyv bundleDNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
- ▌ Latchbio Integration · viggyv bundleLatch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration.
- ▌ Opentargets Database · viggyv bundleQuery Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for therapeutic target identification.
- ▌ Performance Profiler · viggyv bundleYou are an expert at identifying and fixing performance bottlenecks in code.
- ▌ Statistical Analysis · viggyv bundleStatistical analysis toolkit. Hypothesis tests (t-test, ANOVA, chi-square), regression, correlation, Bayesian stats, power analysis, assumption checks, APA reporting, for academic research.
- ▌ Systematic Debugging · viggyv bundleFour-phase debugging framework that ensures root cause investigation before attempting fixes. Never jump to solutions.
- ▌ Get Available Resources · viggyv bundleThis skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file wi
- ▌ Linkedin Post Formatter · viggyv bundleYou are an expert at creating engaging LinkedIn posts that drive engagement and build professional presence.
- ▌ Microservices Architect · viggyv bundleYou are an expert at designing and building microservices architectures.
- ▌ Protocolsio Integration · viggyv bundleIntegration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and
- ▌ Simplification Cascades · viggyv bundleFind one insight that eliminates multiple components - "if this is true, we don't need X, Y, or Z
- ▌ Test Driven Development Tdd · viggyv bundleWrite the test first, watch it fail, write minimal code to pass
- ▌ Content Trend Researcher · viggyv bundleAdvanced content and topic research skill that analyzes trends across Google Analytics, Google Trends, Substack, Medium, Reddit, LinkedIn, X, blogs, podcasts, and YouTube to generate data-driven artic
- ▌ Meta Pattern Recognition · viggyv bundleSpot patterns appearing in 3+ domains to find universal principles
- ▌ Scientific Brainstorming · viggyv bundleResearch ideation partner. Generate hypotheses, explore interdisciplinary connections, challenge assumptions, develop methodologies, identify research gaps, for creative scientific problem-solving.
- ▌ Scientific Visualization · viggyv bundleCreate publication figures with matplotlib/seaborn/plotly. Multi-panel layouts, error bars, significance markers, colorblind-safe, export PDF/EPS/TIFF, for journal-ready scientific plots.
- ▌ Exploratory Data Analysis · viggyv bundlePerform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, conten
- ▌ Remembering Conversations · viggyv bundleSearch previous Claude Code conversations for facts, patterns, decisions, and context using semantic or text search
- ▌ Tracing Knowledge Lineages · viggyv bundleUnderstand how ideas evolved over time to find old solutions for new problems and avoid repeating past failures
- ▌ Subagent Driven Development · viggyv bundleExecute implementation plan by dispatching fresh subagent for each task, with code review between tasks
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- ▌ Python Architect · viggyv bundleYou are an expert at Python application architecture and best practices.
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- ▌ Uniprot Database · viggyv bundleDirect REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services
- ▌ Analytics Builder · viggyv bundleYou are an expert at building analytics solutions and business intelligence systems.
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- ▌ Drugbank Database · viggyv bundleAccess and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should b
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- ▌ Literature Review · viggyv bundleConduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature
- ▌ OAUTH Implementer · viggyv bundleYou are an expert at implementing OAuth 2.0 and authentication systems.
- ▌ Omero Integration · viggyv bundleMicroscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.
- ▌ Openalex Database · viggyv bundleQuery and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, t
- ▌ Perplexity Search · viggyv bundlePerform AI-powered web searches with real-time information using Perplexity models via LiteLLM and OpenRouter. This skill should be used when conducting web searches for current information, finding r
- ▌ Pytorch Lightning · viggyv bundleDeep learning framework (PyTorch Lightning). Organize PyTorch code into LightningModules, configure Trainers for multi-GPU/TPU, implement data pipelines, callbacks, logging (W&B, TensorBoard), distrib
- ▌ Scientific Critical Thinking · viggyv bundleEvaluate research rigor. Assess methodology, experimental design, statistical validity, biases, confounding, evidence quality (GRADE, Cochrane ROB), for critical analysis of scientific claims.
- ▌ Testing Skills With Subagents · viggyv bundleRED-GREEN-REFACTOR for process documentation - baseline without skill, write addressing failures, iterate closing loopholes
- ▌ Finishing A Development Branch · viggyv bundleComplete feature development with structured options for merge, PR, or cleanup
- ▌ Preserving Productive Tensions · viggyv bundleRecognize when disagreements reveal valuable context, preserve multiple valid approaches instead of forcing premature resolution
- ▌ Verification Before Completion · viggyv bundleRun verification commands and confirm output before claiming success
- ▌ Metabolomics Workbench Database · viggyv bundleAccess NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for metabolomics and biomarker discovery.
- ▌ Using Tmux For Interactive Commands · viggyv bundleUse when you need to run interactive CLI tools (vim, git rebase -i, Python REPL, etc.) that require real-time input/output - provides tmux-based approach for controlling interactive sessions through d
- ▌ Pulling Updates From Skills Repository · viggyv bundleSync local skills repository with upstream changes from obra/superpowers-skills
- ▌ Reactome Database · viggyv bundleQuery Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.
- ▌ Slack Gif Creator · viggyv bundleKnowledge and utilities for creating animated GIFs optimized for Slack. Provides constraints, validation tools, and animation concepts. Use when users request animated GIFs for Slack like "make me a G
- ▌ Stable Baselines3 · viggyv bundleUse this skill for reinforcement learning tasks including training RL agents (PPO, SAC, DQN, TD3, DDPG, A2C, etc.), creating custom Gym environments, implementing callbacks for monitoring and control,
- ▌ Typescript Helper · viggyv bundleYou are an expert at TypeScript development and type system usage.
- ▌ Using Superpowers · viggyv bundleUse when starting any conversation - establishes mandatory workflows for finding and using skills, including using Skill tool before announcing usage, following brainstorming before coding, and creati
- ▌ Vector DB Manager · viggyv bundleYou are an expert at managing vector databases for AI/ML applications.
- ▌ Alex Hormozi Pitch · viggyv bundleCreate irresistible offers and pitches using Alex Hormozi's methodology from $100M Offers. Guides through value equation, guarantee frameworks, pricing psychology, and creating offers "too good not to
- ▌ Alphafold Database · viggyv bundleAccess AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biolog
- ▌ Datacommons Client · viggyv bundleWork with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statisti
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- ▌ Inversion Exercise · viggyv bundleFlip core assumptions to reveal hidden constraints and alternative approaches - "what if the opposite were true?
- ▌ Root Cause Tracing · viggyv bundleSystematically trace bugs backward through call stack to find original trigger
- ▌ Scholar Evaluation · viggyv bundleSystematic framework for evaluating scholarly and research work based on the ScholarEval methodology. This skill should be used when assessing research papers, evaluating literature reviews, scoring r
- ▌ Docker Composer · viggyv bundleYou are an expert at creating optimized Docker configurations for applications.
- ▌ Endpoint Tester · viggyv bundleYou are an expert at testing API endpoints thoroughly and systematically.
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- ▌ Goal Translator · viggyv bundleYou are an expert at converting vague goals into specific, actionable plans with clear metrics.
- ▌ Prompt Engineer · viggyv bundleYou are an expert at crafting effective prompts for LLMs to achieve optimal results.
- ▌ Pubmed Database · viggyv bundleDirect REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/R
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- ▌ Schema Migrator · viggyv bundleYou are an expert at database schema migrations and version control.
- ▌ Scikit Survival · viggyv bundleComprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored survival data, performing time-to-event analysis, fitt
- ▌ String Database · viggyv bundleQuery STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.
- ▌ Test Automation · viggyv bundleYou are an expert at building automated testing pipelines and frameworks.
- ▌ Pdb Database · viggyv bundleAccess RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
- ▌ Scikit Learn · viggyv bundleMachine learning in Python with scikit-learn. Use when working with supervised learning (classification, regression), unsupervised learning (clustering, dimensionality reduction), model evaluation, hy
- ▌ Story Mapper · viggyv bundleYou are an expert at transforming ideas into compelling narratives and user stories.
- ▌ Tooluniverse · viggyv bundleUse this skill when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery. This skill provides acces
- ▌ Transformers · viggyv bundleThis skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks. Use for text generation, classification, questi
- ▌ Getting Started With Skills · viggyv bundleSkills wiki intro - mandatory workflows, search tool, brainstorming triggers
- ▌ Video Script Writer · viggyv bundleYou are an expert at creating engaging video scripts for various platforms and formats.
- ▌ Startup Agent · viggyv bundleUse when the user says /startup or asks for end-to-end startup workflows like MVP builds, go-to-market launches, pitch decks, or product analytics - routes to the right pipeline and invokes pipeline-orchestrator to execute it
- ▌ Brainstorming Ideas Into Designs · viggyv bundleInteractive idea refinement using Socratic method to develop fully-formed designs
- ▌ Canvas Design · viggyv bundleCreate beautiful visual art in .png and .pdf documents using design philosophy. You should use this skill when the user asks to create a poster, piece of art, design, or other static piece. Create ori
- ▌ CI CD Builder · viggyv bundleYou are an expert at building CI/CD pipelines for automated testing and deployment.
- ▌ Code Refactor · viggyv bundleYou are an expert at refactoring code to improve quality without changing behavior.
- ▌ Code Reviewer · viggyv bundleYou are an expert code reviewer providing thorough, constructive feedback on code quality.
- ▌ Pipeline Orchestrator · viggyv bundleUse when a super-agent (coding-agent, docs-agent, startup-agent) needs to execute a multi-stage pipeline defined in JSON - resolves template variables, manages sequential/parallel/chain stage execution, enforces quality gates, and passes data between stages via file outputs
- ▌ Benchling Integration · viggyv bundleBenchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
- ▌ Gardening Skills Wiki · viggyv bundleMaintain skills wiki health - check links, naming, cross-references, and coverage
- ▌ Hypothesis Generation · viggyv bundleGenerate testable hypotheses. Formulate from observations, design experiments, explore competing explanations, develop predictions, propose mechanisms, for scientific inquiry across domains.
- ▌ Opentrons Integration · viggyv bundleLab automation platform for Flex/OT-2 robots. Write Protocol API v2 protocols, liquid handling, hardware modules (heater-shaker, thermocycler), labware management, for automated pipetting workflows.
- ▌ Code Review Reception · viggyv bundleReceive and act on code review feedback with technical rigor, not performative agreement or blind implementation
- ▌ Testing Anti Patterns · viggyv bundleNever test mock behavior. Never add test-only methods to production classes. Understand dependencies before mocking.
- ▌ Web Artifacts Builder · viggyv bundleSuite of tools for creating elaborate, multi-component claude.ai HTML artifacts using modern frontend web technologies (React, Tailwind CSS, shadcn/ui). Use for complex artifacts requiring state manag
- ▌ Labarchive Integration · viggyv bundleElectronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows.
- ▌ Requesting Code Review · viggyv bundleDispatch code-reviewer subagent to review implementation against plan or requirements before proceeding
- ▌ Clinicaltrials Database · viggyv bundleQuery ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
- ▌ Collision Zone Thinking · viggyv bundleForce unrelated concepts together to discover emergent properties - "What if we treated X like Y?
- ▌ Condition Based Waiting · viggyv bundleReplace arbitrary timeouts with condition polling for reliable async tests
- ▌ Torch Geometric · viggyv bundleGraph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning.
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