ViggyV
- 234 skills
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- 4 hours ago last updated
- ▌ Pipeline Creator · viggyvUse when the user wants to create a custom agent pipeline, add a new pipeline to an existing agent, or design a multi-stage workflow that chains skills together - guides through pipeline JSON creation with validation
- ▌ Biorxiv Database · viggyv bundleEfficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downl
- ▌ Brand Guidelines · viggyv bundleApplies Anthropic's official brand colors and typography to any sort of artifact that may benefit from having Anthropic's look-and-feel. Use it when brand colors or style guidelines, visual formatting
- ▌ Cellxgene Census · viggyv bundleQuery CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.
- ▌ Clinpgx Database · viggyv bundleAccess ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
- ▌ Clinvar Database · viggyv bundleQuery NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
- ▌ Decision Journal · viggyv bundleYou are an expert at helping structure, document, and analyze important decisions.
- ▌ Defense In Depth Validation · viggyv bundleValidate at every layer data passes through to make bugs impossible
- ▌ Ensembl Database · viggyv bundleQuery Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
- ▌ Monitoring Setup · viggyv bundleYou are an expert at setting up monitoring, logging, and alerting systems.
- ▌ Playwright Browser Automation · viggyv bundleComplete browser automation with Playwright. Auto-detects dev servers, writes clean test scripts to /tmp. Test pages, fill forms, take screenshots, check responsive design, validate UX, test login flo
- ▌ Pubchem Database · viggyv bundleQuery PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics.
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- ▌ Data Pipeline · viggyv bundleYou are an expert at building robust data pipelines and ETL processes.
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- ▌ Etl Optimizer · viggyv bundleYou are an expert at optimizing ETL/ELT pipelines for performance and efficiency.
- ▌ Gene Database · viggyv bundleQuery NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
- ▌ Gwas Database · viggyv bundleQuery NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
- ▌ Hmdb Database · viggyv bundleAccess Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties, biomarker data, NMR/MS spectra, pathways, for metabolomics and identification.
- ▌ Kegg Database · viggyv bundleDirect REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer b
- ▌ Linkedin Post Creator · viggyv bundleYou are an expert LinkedIn content strategist helping create viral-worthy professional content.
- ▌ Merge Resolver · viggyv bundleYou are an expert at resolving Git merge conflicts and managing complex merges.
- ▌ Mlops Pipeline · viggyv bundleYou are an expert at building production ML pipelines with proper MLOps practices.
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- ▌ Uspto Database · viggyv bundleAccess USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.
- ▌ Writing Skills · viggyv bundleTDD for process documentation - test with subagents before writing, iterate until bulletproof
- ▌ Algorithmic Art · viggyv bundleCreating algorithmic art using p5.js with seeded randomness and interactive parameter exploration. Use this when users request creating art using code, generative art, algorithmic art, flow fields, or
- ▌ Chatbot Creator · viggyv bundleYou are an expert at building conversational AI chatbots for various use cases.
- ▌ Chembl Database · viggyv bundleQuery ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistr
- ▌ Cloud Architect · viggyv bundleYou are an expert at designing cloud infrastructure and architecture.
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- ▌ Cosmic Database · viggyv bundleAccess COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
- ▌ Database Schema Designer · viggyv bundleYou are an expert at designing efficient, scalable database schemas.
- ▌ Debug Assistant · viggyv bundleYou are an expert at systematic debugging and problem-solving for code issues.
- ▌ Medium Post Writer · viggyv bundleYou are an expert at creating engaging Medium articles that get read and shared.
- ▌ Paper 2 Web · viggyv bundleThis skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference poster
- ▌ Peer Review · viggyv bundleSystematic peer review toolkit. Evaluate methodology, statistics, design, reproducibility, ethics, figure integrity, reporting standards, for manuscript and grant review across disciplines.
- ▌ Pitch Coach · viggyv bundleYou are an expert pitch coach helping craft compelling presentations and pitches.
- ▌ Pr Reviewer · viggyv bundleYou are an expert at reviewing pull requests and providing constructive feedback.
- ▌ RAG Builder · viggyv bundleYou are an expert at building Retrieval-Augmented Generation (RAG) systems for production use.
- ▌ Statsmodels · viggyv bundleStatistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for rigorous statistical inference and econometric analysis.
- ▌ Zarr Python · viggyv bundleChunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.
- ▌ Coding Agent · viggyv bundleUse when the user says /code or asks for end-to-end coding workflows like full-stack builds, quality audits, rapid prototypes, or debug chains - routes to the right pipeline and invokes pipeline-orchestrator to execute it
- ▌ API Designer · viggyv bundleYou are an expert at designing clean, scalable, and developer-friendly APIs.
- ▌ Ena Database · viggyv bundleAccess European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
- ▌ Fda Database · viggyv bundleQuery openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
- ▌ Geo Database · viggyv bundleAccess NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
- ▌ PPTX · viggyv bundlePresentation toolkit (.pptx). Create/edit slides, layouts, content, speaker notes, comments, for programmatic presentation creation and modification.
- ▌ Pymc Bayesian Modeling · viggyv bundleBayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.
- ▌ Vaex · viggyv bundleUse this skill for processing and analyzing large tabular datasets (billions of rows) that exceed available RAM. Vaex excels at out-of-core DataFrame operations, lazy evaluation, fast aggregations, ef
- ▌ XLSX · viggyv bundleSpreadsheet toolkit (.xlsx/.csv). Create/edit with formulas/formatting, analyze data, visualization, recalculate formulas, for spreadsheet processing and analysis.
- ▌ Gtars · viggyv bundleHigh-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, o
- ▌ Modal · viggyv bundleRun Python code in the cloud with serverless containers, GPUs, and autoscaling. Use when deploying ML models, running batch processing jobs, scheduling compute-intensive tasks, or serving APIs that re
- ▌ Pymoo · viggyv bundleMulti-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.
- ▌ Pysam · viggyv bundleGenomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
- ▌ Pytdc · viggyv bundleTherapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and pharmacological prediction.
- ▌ LLM Optimizer · viggyv bundleYou are an expert at optimizing LLM applications for performance, cost, and quality.
- ▌ Meeting Recap · viggyv bundleYou are an expert at creating clear, actionable meeting summaries and follow-ups.
- ▌ Model Trainer · viggyv bundleYou are an expert at training, fine-tuning, and evaluating machine learning models.
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- ▌ Skill Creator · viggyv bundleGuide for creating effective skills. This skill should be used when users want to create a new skill (or update an existing skill) that extends Claude's capabilities with specialized knowledge, workfl
- ▌ SQL Optimizer · viggyv bundleYou are an expert at optimizing SQL queries for performance and efficiency.
- ▌ Theme Factory · viggyv bundleToolkit for styling artifacts with a theme. These artifacts can be slides, docs, reportings, HTML landing pages, etc. There are 10 pre-set themes with colors/fonts that you can apply to any artifact t
- ▌ Zinc Database · viggyv bundleAccess ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for docking, analog discovery, for virtual screening and drug discovery.
- ▌ Agent Designer · viggyv bundleYou are an expert at designing and building AI agents with tool use and autonomous capabilities.
- ▌ API Documenter · viggyv bundleYou are an expert at creating comprehensive, developer-friendly API documentation.
- ▌ Data Validator · viggyv bundleYou are an expert at implementing data validation and quality checks.
- ▌ Email Polisher · viggyv bundleYou are an expert at crafting professional, effective emails for any business context.
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- ▌ MCP Management · viggyv bundleManage Model Context Protocol (MCP) servers - discover, analyze, and execute tools/prompts/resources from configured MCP servers. Use when working with MCP integrations, need to discover available MCP
- ▌ Etetoolkit · viggyv bundlePhylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
- ▌ Ffuf Web Fuzzing · viggyv bundleExpert guidance for ffuf web fuzzing during penetration testing, including authenticated fuzzing with raw requests, auto-calibration, and result analysis
- ▌ Markitdown · viggyv bundleConvert various file formats (PDF, Office documents, images, audio, web content, structured data) to Markdown optimized for LLM processing. Use when converting documents to markdown, extracting text f
- ▌ Matplotlib · viggyv bundleFoundational plotting library. Create line plots, scatter, bar, histograms, heatmaps, 3D, subplots, export PNG/PDF/SVG, for scientific visualization and publication figures.
- ▌ Newsletter Creator · viggyv bundleYou are an expert newsletter writer helping create engaging, valuable email content.
- ▌ Pylabrobot · viggyv bundleLaboratory automation toolkit for controlling liquid handlers, plate readers, pumps, heater shakers, incubators, centrifuges, and analytical equipment. Use this skill when automating laboratory workfl
- ▌ Scale Game · viggyv bundleTest at extremes (1000x bigger/smaller, instant/year-long) to expose fundamental truths hidden at normal scales
- ▌ Scikit Bio · viggyv bundleBiological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.
- ▌ Scvi Tools · viggyv bundleThis skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use
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- ▌ Umap Learn · viggyv bundleUMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for high-dimensional data.
- ▌ When Stuck Problem Solving Dispatch · viggyv bundleDispatch to the right problem-solving technique based on how you're stuck
- ▌ Bioservices · viggyv bundlePrimary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. F
- ▌ MCP Builder · viggyv bundleGuide for creating high-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate externa
- ▌ Shap · viggyv bundleModel interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP p
- ▌ Writing Plans · viggyv bundleCreate detailed implementation plans with bite-sized tasks for engineers with zero codebase context
- ▌ Esm · viggyv bundleComprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representat
- ▌ PDF · viggyv bundlePDF manipulation toolkit. Extract text/tables, create PDFs, merge/split, fill forms, for programmatic document processing and analysis.
- ▌ Aeon · viggyv bundleThis skill should be used for time series machine learning tasks including classification, regression, clustering, forecasting, anomaly detection, segmentation, and similarity search. Use when working
- ▌ Dask · viggyv bundleParallel/distributed computing. Scale pandas/NumPy beyond memory, parallel DataFrames/Arrays, multi-file processing, task graphs, for larger-than-RAM datasets and parallel workflows.
- ▌ DOCX · viggyv bundleDocument toolkit (.docx). Create/edit documents, tracked changes, comments, formatting preservation, text extraction, for professional document processing.
- ▌ Gget · viggyv bundleCLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases: gene info (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, genome d
- ▌ Pyhealth · viggyv bundleComprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR), clin
- ▌ Pymatgen · viggyv bundleMaterials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science.
- ▌ Pyopenms · viggyv bundlePython interface to OpenMS for mass spectrometry data analysis. Use for LC-MS/MS proteomics and metabolomics workflows including file handling (mzML, mzXML, mzTab, FASTA, pepXML, protXML, mzIdentML),
- ▌ Biopython · viggyv bundlePrimary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, s
- ▌ Deeptools · viggyv bundleNGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.
- ▌ Hypogenic · viggyv bundleAutomated hypothesis generation and testing using large language models. Use this skill when generating scientific hypotheses from datasets, combining literature insights with empirical data, testing
- ▌ Neurokit2 · viggyv bundleComprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activi