brycewang-stanford
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- ▌ Core API Guide · brycewang-stanfordSearch and retrieve open access research papers via CORE aggregator
- ▌ Findpapers Guide · brycewang-stanfordSearch multiple academic databases simultaneously with Findpapers
- ▌ Mesh Terms Guide · brycewang-stanfordNavigate MeSH vocabulary for precise PubMed and MEDLINE searches
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- ▌ Rd Agent Guide · brycewang-stanfordMicrosoft AI-driven R&D agent for automated data and model development
- ▌ Osf API Guide · brycewang-stanfordAccess Open Science Framework for preregistrations, preprints, and data
- ▌ Google Colab Guide · brycewang-stanfordRun and manage Google Colab notebooks for Python and ML research
- ▌ Overleaf CLI Guide · brycewang-stanfordSync and manage Overleaf LaTeX projects from the command line
- ▌ Code Flow Visualizer · brycewang-stanfordConvert Python, JavaScript, and TypeScript functions into Mermaid flowcharts
- ▌ JSON Data Visualizer · brycewang-stanfordGuide to JSON Crack for visualizing complex JSON data structures
- ▌ Academic Tone Guide · brycewang-stanfordAdjust writing tone and register for academic audiences and venues
- ▌ Novathesis Guide · brycewang-stanfordLaTeX thesis template supporting multiple universities and formats
- ▌ Sjtuthesis Guide · brycewang-stanfordWrite SJTU theses using the SJTUThesis LaTeX template with full compliance
- ▌ Python Panel Data · brycewang-stanford bundlePanel data analysis with Python using linearmodels and pandas.
- ▌ Commit Push Pr · brycewang-stanford bundleCommit changes, push to remote, and create a pull request. Use for completing features or fixes ready for review.
- ▌ Daaf Orchestrator · brycewang-stanford bundleOperational framework for the DAAF orchestrator. Defines engagement modes, confirmation protocol, subagent dispatch, context budget, and reference-loading. Loaded exclusively by the orchestrator — not for subagents or user questions.
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- ▌ AI Model Benchmarking · brycewang-stanfordBenchmark AI models across 60+ academic evaluation suites and metrics
- ▌ Computer Vision Guide · brycewang-stanfordApply computer vision research methods, models, and evaluation tools
- ▌ Ena Sequence API · brycewang-stanfordAccess nucleotide sequence data from the European Nucleotide Archive
- ▌ Ensembl REST API · brycewang-stanfordQuery gene, sequence, and variant data via the Ensembl REST API
- ▌ Medical Data API · brycewang-stanfordAccess FDA drug data and WHO global health statistics for research
- ▌ Catalysis Hub API · brycewang-stanfordQuery computational catalysis reaction data via Catalysis Hub GraphQL
- ▌ Pubchem API Guide · brycewang-stanfordSearch PubChem for chemical compounds, structures, and bioassay data
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- ▌ Open Syllabus API · brycewang-stanfordAnalyze most-taught books and texts via Open Syllabus analytics
- ▌ Risk Modeling Guide · brycewang-stanfordFinancial risk modeling including VaR, stress testing, and credit risk
- ▌ Pangaea Data API · brycewang-stanfordAccess earth and environmental science datasets via PANGAEA API
- ▌ Topology Data Analysis · brycewang-stanfordTopological data analysis: persistent homology, Mapper, and TDA tools
- ▌ Hal Archive API · brycewang-stanfordAccess French and European research via the HAL open archive API
- ▌ Mle Agent Guide · brycewang-stanfordIntelligent companion for ML engineering with arXiv integration
- ▌ Grant Budget Guide · brycewang-stanfordPrepare and justify research grant budgets across funding agencies
- ▌ Open Science Guide · brycewang-stanfordPre-registration, open data, and FAIR principles for research
- ▌ Mermaid Diagram Guide · brycewang-stanfordCreate flowcharts, sequence diagrams, and architecture diagrams with Mermaid
- ▌ PDF Extraction Guide · brycewang-stanfordPDF parsing, text extraction, and document format conversion
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- ▌ Latex Ocr Guide · brycewang-stanfordExtract and convert mathematical formulas from images and PDFs to LaTeX code
- ▌ Dataset Finder Guide · brycewang-stanfordSearch and download research datasets from Kaggle, HuggingFace, and repos
- ▌ Latex Ecosystem Guide · brycewang-stanfordComprehensive guide to LaTeX editors, packages, and typesetting workflows
- ▌ AI Writing Humanizer · brycewang-stanfordRemove AI-generated patterns to produce natural, authentic academic writing
- ▌ Code Simplifier · brycewang-stanford bundleSimplify and clean up code after changes are complete. Reduces complexity, improves readability, and ensures consistency.
- ▌ Latex Conference Template Organizer · brycewang-stanfordOrganize messy conference LaTeX template .zip files into clean Overleaf-ready structure. Use when the user asks to "organize LaTeX template", "clean up .zip template", or "prepare Overleaf submission template".
- ▌ CSV Data Analyzer · brycewang-stanfordLoad, explore, clean, and analyze CSV data with statistical summaries
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- ▌ LLM From Scratch Guide · brycewang-stanfordBuild a ChatGPT-like LLM from scratch using PyTorch step by step
- ▌ Ncbi Datasets API · brycewang-stanfordAccess genomes, genes, and taxonomy data via NCBI Datasets v2 API
- ▌ Pdb Structure API · brycewang-stanfordSearch and retrieve 3D protein structures from the RCSB Protein Data Bank
- ▌ Distributed Systems Guide · brycewang-stanfordDistributed systems design patterns and analysis for CS research
- ▌ Formal Verification Guide · brycewang-stanfordFormal methods, theorem proving, and model checking for CS research
- ▌ Imf Data API Guide · brycewang-stanfordRetrieve IMF economic indicators, exchange rates, and country data
- ▌ Akshare Finance Data · brycewang-stanfordAccess Chinese and global financial data using the AkShare Python library
- ▌ Legal Agent Skills Guide · brycewang-stanfordAgent skills collection for legal research and automation
- ▌ Numerical Methods Guide · brycewang-stanfordApply numerical methods and scientific computing techniques
- ▌ Rss Paper Feeds · brycewang-stanfordSet up RSS feeds and alerts to track new publications in your research area
- ▌ Altmetrics Guide · brycewang-stanfordGuide to altmetrics and research impact beyond traditional citations
- ▌ Eric Education API · brycewang-stanfordSearch 2M+ education research records via the ERIC database API
- ▌ Lens Scholarly API · brycewang-stanfordSearch 300M+ scholarly and patent records via the Lens.org API
- ▌ Share Research API · brycewang-stanfordDiscover open access research outputs via the SHARE notification API
- ▌ Grant Writing Guide · brycewang-stanfordWrite competitive research proposals with clear objectives and budgets
- ▌ Nsf Award API Guide · brycewang-stanfordSearch NSF awards and grants with free public API, no auth required
- ▌ Large Document Reader · brycewang-stanfordSplit and read long documents chapter-by-chapter for structured analysis
- ▌ Graphiti Guide · brycewang-stanfordBuild real-time knowledge graphs for AI agents using Graphiti by Zep
- ▌ Academic Web Scraping · brycewang-stanfordEthical web scraping and API-based data collection for research
- ▌ Academic Writing Latex · brycewang-stanfordLaTeX-based academic writing assistant for thesis and paper templates
- ▌ Math Typesetting Guide · brycewang-stanfordLaTeX math typesetting, equation formatting, and cross-referencing
- ▌ Grammar Checker Guide · brycewang-stanfordUse grammar and style checking tools to polish academic manuscripts
- ▌ Review Julia · brycewang-stanfordRun the Julia code review protocol on Julia scripts. Checks code quality, type stability, parallel computing patterns, and scientific computing standards. Produces a report without editing files.
- ▌ Stata C Plugins · brycewang-stanford bundleDevelop high-performance C/C++ plugins for Stata using the stplugin.h SDK. Use when the user asks to create a Stata plugin, write C/C++ code for Stata, accelerate a Stata command with C, build cross-platform Stata plugins, or translate/port a Python or R package into Stata. Covers the full lifecycle: SDK setup, data flow, memory safety, .ado wrappers with preserve/merge, cross-platform compilation, performance optimization (pthreads, pre-sorted indices, XorShift RNG), debugging, and distribution via net install. Also includes a translation workflow for porting Python/R packages to Stata — wrapping existing C++ backends when available, or writing C from scratch when not.
- ▌ Geospatial Viz Guide · brycewang-stanfordCreate maps, choropleths, and spatial data visualizations for research
- ▌ Python Dataviz Guide · brycewang-stanfordPublication-quality data visualization with matplotlib, seaborn, and plotly
- ▌ Dl Transformer Finetune · brycewang-stanfordBuild transformer fine-tuning plans for classification and generation
- ▌ Pytorch Lightning Guide · brycewang-stanfordPyTorch Lightning framework for scalable model training and research
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- ▌ Epidemiology Guide · brycewang-stanfordEpidemiological study designs, measures of association, and public health ana...
- ▌ Repec Economics API · brycewang-stanfordAccess 4M+ economics working papers and articles via RePEc API
- ▌ Drug Development Guide · brycewang-stanfordEnd-to-end drug development pipeline from target identification to regulatory...
- ▌ Open Access Guide · brycewang-stanfordNavigate open access policies, repositories, and legal full-text retrieval me...
- ▌ Opencitations API · brycewang-stanfordQuery open citation data and reference networks via OpenCitations
- ▌ Plumx Metrics API · brycewang-stanfordTrack research impact beyond citations via PlumX altmetrics API
- ▌ Baidu Scholar Guide · brycewang-stanfordUsing Baidu Scholar for Chinese and English academic literature search
- ▌ Worldcat Search API · brycewang-stanfordSearch the world's largest library catalog via OCLC WorldCat API
- ▌ Mermaid Architect Guide · brycewang-stanfordDesign complex multi-diagram architectures using advanced Mermaid syntax
- ▌ Tldraw Whiteboard Guide · brycewang-stanfordGuide to tldraw for infinite canvas whiteboarding and diagram creation
- ▌ Google Scholar Scraper · brycewang-stanfordEthical Google Scholar data collection techniques and best practices
- ▌ Citation Style Guide · brycewang-stanfordAPA, MLA, Chicago citation format guide with CSL configuration
- ▌ Zotero Mdnotes Guide · brycewang-stanfordExport Zotero items and annotations to Markdown note files
- ▌ Zotero Scholar Guide · brycewang-stanfordSave papers with metadata to Zotero via its API programmatically
- ▌ Chinese Text Humanizer · brycewang-stanfordTransform AI-generated Chinese text into natural academic writing style
- ▌ Academic Paper Writer · brycewang-stanford bundleDraft economics papers with proper structure and academic style
- ▌ Translate To Quarto · brycewang-stanfordTranslate Beamer LaTeX to Quarto RevealJS. Multi-phase workflow with TikZ extraction and QA.
- ▌ Education Data Query · brycewang-stanford bundleDownloads education datasets from configured mirror sources (parquet/CSV) with local Polars filtering. Use when writing fetch scripts or retrieving CCD, IPEDS, CRDC, SAIPE data. Load after education-data-explorer — retrieval here, not discovery.
- ▌ R Python Translation · brycewang-stanford bundleR-to-Python translation for data analysis. Maps R packages (tidyverse, ggplot2, fixest, survey, sf, plm) to Python equivalents (polars, plotnine, pyfixest, svy, geopandas). Use when user has R background or requests R-equivalent code comments.
- ▌ Chart Image Generator · brycewang-stanfordGenerate publication-quality chart images from research data
- ▌ Interactive Viz Guide · brycewang-stanfordInteractive data visualization with Plotly, ECharts, and D3
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- ▌ Market Analysis Guide · brycewang-stanfordStructured frameworks for market sizing, competitive analysis, and strategic ...
- ▌ Retrosynthesis Guide · brycewang-stanfordRetrosynthetic analysis and computational reaction prediction
- ▌ Algorithms Complexity Guide · brycewang-stanfordAnalyze algorithm complexity and computational efficiency for research
- ▌ Post Labor Economics · brycewang-stanfordPost-labor economies with automation, UBI, and wealth distribution
- ▌ Mooc Analytics Guide · brycewang-stanfordAnalyzing MOOC data, learning analytics, and online education metrics