brycewang-stanford
- 5.3k skills
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- 1k repo stars
- 2 weeks ago last updated
- ▌ Docsgpt Guide · brycewang-stanfordDeploy DocsGPT for private document analysis and research knowledge bases
- ▌ Building Paper Screening Rubrics · brycewang-stanfordCollaboratively build and refine paper screening rubrics through brainstorming, test-driven development, and iterative feedback
- ▌ Evaluating Paper Relevance · brycewang-stanfordTwo-stage paper screening - abstract scoring then deep dive for specific data extraction
- ▌ Finding Open Access Papers · brycewang-stanfordUse Unpaywall API to find free full-text versions of paywalled papers
- ▌ Techdebt · brycewang-stanford bundleFind and fix technical debt including duplicated code, dead code, outdated patterns, and code smells. Run at the end of sessions to clean up.
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- ▌ Statsmodels · brycewang-stanford bundleStatistical modeling: OLS/WLS/GLS, GLM (logit, probit, Poisson), time series (ARIMA, VAR), mixed effects, diagnostics. Formula API. Use for regressions without fixed effects, GLMs, or time series. For FE/DiD use pyfixest; panel/IV use linearmodels.
- ▌ Mathematical Foundations · brycewang-stanfordCore mathematical concepts and theoretical frameworks for statistics
- ▌ Obsidian Literature Workflow · brycewang-stanford bundleUse this skill when the user keeps paper notes inside an Obsidian project knowledge base and wants filesystem-first literature review, explicit agent-first Zotero ingestion, `Papers/` plus `Knowledge/` synthesis, collection-wide normalization, and a default literature canvas without Obsidian MCP.
- ▌ Audit Replication · brycewang-stanfordValidate the replication package for the sewage-house-prices project. Runs 10 checks covering script execution, file integrity, output freshness, dependency verification, data provenance, and README completeness (AEA format). This skill should be used when asked to "audit replication", "check the package", or "verify reproducibility".
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- ▌ Huggingface API · brycewang-stanfordSearch and discover ML models, datasets, and Spaces on Hugging Face
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- ▌ Orcid API · brycewang-stanfordLook up researcher profiles and academic identities via the ORCID registry
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- ▌ API Data Fetcher · brycewang-stanford bundleFetch economic data from FRED, World Bank, and other APIs
- ▌ Linearmodels · brycewang-stanford bundlePanel data, IV/GMM, system regression. PanelOLS (FE/RE), BetweenOLS, Fama-MacBeth, IV2SLS/LIML/GMM, SUR, 3SLS, Driscoll-Kraay SEs. Use for RE/between, system estimation, or GMM. Complements pyfixest (FE + DiD) and statsmodels (GLM + time series).
- ▌ Scikit Learn · brycewang-stanford bundleMachine learning: clustering, PCA/t-SNE/UMAP, classification, prediction regression (Ridge/Lasso/ensemble), cross-validation, Pipelines. For unsupervised analysis, classification, or prediction. For econometric regression use pyfixest/statsmodels.
- ▌ Computational Inference · brycewang-stanfordComputational methods for statistical inference and optimization
- ▌ Statistical Software QA · brycewang-stanfordQuality assurance and testing protocols for statistical software
- ▌ Econometrics Check · brycewang-stanfordCausal inference design audit for the sewage-house-prices project. Runs a 4-phase review (claim identification, design validity, inference, polish) covering hedonic pricing, repeat sales, long difference, DiD/event studies, upstream/downstream, and dry spill strategies. This skill should be used when asked to "check the econometrics", "audit the identification", "review the strategy", or when verifying that code matches the stated design.
- ▌ Respond To Referee · brycewang-stanfordStructure point-by-point referee responses for the sewage-house-prices paper. Classifies each comment (NEW ANALYSIS / CLARIFICATION / REWRITE / DISAGREE / MINOR), produces a tracking document, drafts a response letter in LaTeX, and flags items needing new analysis or user judgment. This skill should be used when asked to "respond to referees", "draft revision", "address referee comments", or "R&R".
- ▌ Auto Paper Improvement Loop · brycewang-stanfordAutonomously improve a generated paper via GPT-5.4 xhigh review → implement fixes → recompile, for 2 rounds. Use when user says \"改论文\", \"improve paper\", \"论文润色循环\", \"auto improve\", or wants to iteratively polish a generated paper.
- ▌ Tensorflow Guide · brycewang-stanfordTensorFlow best practices for tf.function, GPU memory, and deployment
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- ▌ Caselaw Access API · brycewang-stanfordQuery 360+ years of US case law via the Harvard Caselaw Access Project
- ▌ Uk Legislation API · brycewang-stanfordAccess UK laws and statutory instruments via the Legislation.gov.uk API
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- ▌ Openalex API · brycewang-stanfordQuery the OpenAlex catalog of scholarly works, authors, and institutions
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- ▌ Scientific Critical Thinking · brycewang-stanfordEvaluate research rigor. Assess methodology, experimental design, statistical validity, biases, confounding, evidence quality (GRADE, Cochrane ROB), for critical analysis of scientific claims.
- ▌ Answering Research Questions · brycewang-stanfordMain orchestration workflow for systematic literature research - search, evaluate, traverse, synthesize
- ▌ Extract Tikz · brycewang-stanfordExtract TikZ diagrams from Beamer source, compile to PDF, convert to SVG with 0-based indexing. Use when updating TikZ diagrams for Quarto slides.
- ▌ Visual Audit · brycewang-stanfordPerform adversarial visual audit of Quarto or Beamer slides checking for overflow, font consistency, box fatigue, and layout issues.
- ▌ Research Director · brycewang-stanford bundleStrategic research leadership for designing high-impact research agendas, coordinating teams, and translating research into policy and institutional influence.
- ▌ Ml Pipeline Guide · brycewang-stanfordBuild and deploy reproducible production ML pipelines for research
- ▌ Nlp Toolkit Guide · brycewang-stanfordNLP analysis with perplexity scoring, burstiness, and entropy metrics
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- ▌ Opencontracts Guide · brycewang-stanfordLegal document annotation, versioning, and analysis platform
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- ▌ Citeseerx API · brycewang-stanfordSearch computer science literature via the CiteSeerX digital library
- ▌ Kroki Diagram API · brycewang-stanfordGenerate diagrams from text via Kroki's multi-format rendering API
- ▌ Cleaning Up Research Sessions · brycewang-stanfordSafely remove intermediate files from completed research sessions while preserving important data
- ▌ R Econometrics · brycewang-stanford bundleRun IV, DiD, and RDD analyses in R with proper diagnostics
- ▌ Latex Econ Model · brycewang-stanford bundleWrite and typeset economic models in LaTeX with proper notation
- ▌ Data Scientist · brycewang-stanford bundleData science methodology for Python research: EDA, validation, causal inference (IV, DiD, RD, synthetic control), clustering/PCA/UMAP, supervised ML, geospatial, visualization. Method selection guidance. For syntax, load tool-specific skills.
- ▌ Alphafold API · brycewang-stanfordQuery AlphaFold protein structure predictions by UniProt accession
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- ▌ Genomas Guide · brycewang-stanfordAutomate gene expression analysis with the GenoMAS multi-agent system
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- ▌ Software Heritage API · brycewang-stanfordArchive and retrieve source code history via Software Heritage API
- ▌ Legal Research Guide · brycewang-stanfordLegal research methods, case law analysis, and compliance tools
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- ▌ Crossref API · brycewang-stanfordResolve DOIs and retrieve publication metadata from CrossRef registry
- ▌ Datacite API · brycewang-stanfordResolve dataset DOIs and query research data metadata via DataCite
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- ▌ Nsf Grant Guide · brycewang-stanfordNavigate NSF grant applications, program selection, and strategies
- ▌ Kaggle API Guide · brycewang-stanfordDownload datasets, manage competitions and notebooks via Kaggle API
- ▌ Paper Parse Guide · brycewang-stanfordDeep dual-mode reading of academic papers from PDF or URL sources
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- ▌ Papis CLI Guide · brycewang-stanfordGuide to Papis command-line document and bibliography manager for researchers
- ▌ Md To PDF Academic · brycewang-stanfordConvert Markdown to publication-quality PDF with LaTeX math rendering
- ▌ Create Lecture · brycewang-stanfordCreate new Beamer lecture from papers and materials. Guided workflow with notation consistency.
- ▌ Agent Authoring · brycewang-stanford bundleGuide for creating DAAF agent definition files. Covers 12-section template, hook registration, skills-in-frontmatter, integration checklist. Use when adding or revising agents. For SKILL.md files, use skill-authoring instead.
- ▌ Skill Authoring · brycewang-stanford bundleGuide for creating and auditing DAAF skills (SKILL.md). Covers frontmatter, metadata vocabulary, progressive disclosure, decision trees, reference files. Use when creating, reviewing, or debugging skill loading. For agent files, use agent-authoring.
- ▌ Industrial AI Research · brycewang-stanford bundleIndustrial AI literature research with mandatory intake questions, venue-aware source prioritization, structured report outputs, and survey draft generation. Use when the user needs up-to-date research on predictive maintenance, intelligent scheduling, industrial anomaly detection, smart manufacturing, cyber-physical systems, edge AI for automation, or crossover robotics-for-industry topics. Also trigger for adjacent terms: "digital twin", "industrial IoT", "Industry 4.0", "manufacturing AI", "factory automation", "process optimization", or "survey draft" in industrial contexts.
- ▌ Data Cog Guide · brycewang-stanfordUpload messy CSVs with minimal prompting for deep automated analysis
- ▌ Generative AI Guide · brycewang-stanfordCurated guide to generative AI covering LLMs and diffusion models
- ▌ Keras Deep Learning · brycewang-stanfordBuild and debug deep learning models with Keras and TensorFlow backend
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- ▌ Chemeagle Guide · brycewang-stanfordMulti-agent system for chemical literature information extraction
- ▌ Patent Analysis Guide · brycewang-stanfordPatent search, classification, landscape analysis, and prior art mining
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- ▌ Arxiv CLI Tools · brycewang-stanfordCommand-line tools for searching and batch-downloading arXiv papers
- ▌ Chatpaper Guide · brycewang-stanfordUse ChatPaper to summarize and search arXiv papers with LLM assistance
- ▌ Ieee Xplore API · brycewang-stanfordSearch IEEE's 6M+ engineering and CS publications via the Xplore API
- ▌ Eu Horizon Guide · brycewang-stanfordNavigate EU Horizon Europe funding programs and proposal writing
- ▌ Grobid PDF Parsing · brycewang-stanfordExtract structured text, metadata, and references from academic PDFs
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- ▌ Zotero Gpt Guide · brycewang-stanfordGuide to Zotero GPT for AI-powered research assistance within Zotero
- ▌ Zotero MCP Guide · brycewang-stanfordGuide to Zotero MCP for connecting Zotero library with AI assistants
- ▌ Latex Drawing Guide · brycewang-stanfordTikZ and PGFPlots techniques for publication-quality scientific figures
- ▌ Tikz Diagrams Guide · brycewang-stanfordCreate publication-quality scientific diagrams with TikZ in LaTeX
- ▌ Paper Polish Guide · brycewang-stanfordReview and polish LaTeX research papers for clarity and style
- ▌ Thuthesis Guide · brycewang-stanfordWrite Tsinghua University theses using the ThuThesis LaTeX template
- ▌ Stata Regression · brycewang-stanford bundleRun regression analyses in Stata with publication-ready output tables.
- ▌ Devils Advocate · brycewang-stanfordChallenge slide design with 5-7 pedagogical questions. Checks ordering, prerequisites, and cognitive load.
- ▌ Pedagogy Review · brycewang-stanfordRun holistic pedagogical review on lecture slides. Checks narrative arc, student prerequisites, worked examples, notation clarity, and deck pacing.
- ▌ LLM Evaluation Guide · brycewang-stanfordEvaluate and benchmark large language models for research applications
- ▌ Npcpy Research Guide · brycewang-stanfordAll-in-one Python library for NLP, agents, and knowledge graphs
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- ▌ Bioagents Guide · brycewang-stanfordAI scientist framework for autonomous biological research workflows
- ▌ Medgeclaw Guide · brycewang-stanfordAI research assistant for biomedicine, RNA-seq, and drug discovery