stanfish06

@stanfish06 source repo

1.1k skills
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Pharmacokineticist · stanfish06 bundle
Expert-thinking profile for Pharmacokineticist (clinical / research): Reasons from mass balance, exposure-response, and separation of structural from statistical models through NCA in Phoenix WinNonlin, mixed-effects popPK in NONMEM, PBPK in Simcyp/GastroPlus, and VPC diagnostics while treating BLQ mishandling, ETA shrinkage, over-parameterization for small n, and unit/analyte/matrix...

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Photonics Engineer · stanfish06 bundle
Expert-thinking profile for Photonics Engineer (design / simulation / characterization / optical systems & PIC): Reasons from Maxwell modes, FSR–Q–coupling trade-offs, and optical power/loss budgets; designs PICs and free-space systems with FDTD/INTERCONNECT/Zemax/GDSFactory and certifies links with OLTS/OTDR/M² while treating mesh dispersion errors, TE/TM birefringence, APC/PC connector mismatch, OTDR ghost/gainer events, and...

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Plant Physiologist · stanfish06 bundle
Expert-thinking profile for Plant Physiologist (wet-lab / greenhouse / field plant physiology): Reasons from source–sink carbon–water balance, FvCB A–Ci and Ball–Berry gs models, LI-COR/PAM gas exchange, Scholander Ψ, drought–salt–heat signaling, and MIAPPE/Phytozome workflows while treating chamber leakage, pot-bound roots, and Fv/Fm–yield conflation as first-class failure modes.

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Pure Mathematician · stanfish06 bundle
Expert-thinking profile for Pure Mathematician (proof-theoretic / theorem-proof / formal verification (Lean 4/mathlib, Coq, Isabelle) / MSC-classified): Reasons from definitions, axioms, and proved theorems through lemma-ladder proof strategies, computer algebra (SageMath, GAP, Magma) and proof assistants (Lean 4/mathlib, Coq, Isabelle/HOL) checked against MathSciNet/zbMATH and OEIS, while treating hidden hypotheses, circular reasoning, unjustified w.l.o.g. steps, and...

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Robotics Scientist · stanfish06 bundle
Expert-thinking profile for Robotics Scientist (hardware validation / kinematics & dynamics / planning & control (MPC, WBC) / SLAM & perception / sim-to-real / safety (ISO 10218, ISO/TS...): Reasons from the closed sensor-to-actuator loop, kinematic reachability, and dynamic feasibility (friction cones, actuator saturation) through DH/PoE kinematics, RRT*/CHOMP planning, MPC and whole-body control, SLAM, and ROS 2 rosbag logging while treating TF-frame and timestamp mismatches, the sim-to-real gap, grasp...

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Scientific Writing · stanfish06 bundle
Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing prose. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting guidelines (CONSORT/STROBE/PRISMA), for research papers and journal submissions.

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Scrna Orchestrator · stanfish06 bundle
Local Scanpy pipeline for single-cell RNA-seq QC, optional doublet detection, clustering, marker discovery, optional CellTypist annotation, optional latent downstream mode from integrated.h5ad/X_scvi, and optional dataset-level plus within-cluster contrastive marker analysis from raw-count .h5ad or 10x Matrix Market input.

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Microbiome Scientist · stanfish06 bundle
Expert-thinking profile for Microbiome Scientist (cohort / intervention / multi-omics host–microbiome): Reasons from compositional and longitudinal stats (MaAsLin2, ANCOM- BC2), STORMS pre-analytics, FMT/LBP and diet trials, and multi-omics integration; treats PPI/antibiotic confounders, kitome contamination, host-DNA swamping, and HMA causality overclaim as first-class failure modes.

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Mofaplus Multi Omics · stanfish06
Multi-Omics Factor Analysis v2 (MOFA+) with mofapy2. Jointly decompose omics layers (scRNA, ATAC, proteomics, methylation) into latent factors capturing major variation. Multi-group designs. AnnData views → MOFA object → train → variance explained → correlate factors with metadata → visualize/cluster → enrich top loadings.

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Molecular Geneticist · stanfish06 bundle
Expert-thinking profile for Molecular Geneticist (clinical / research): Reasons from sequence-as-hypothesis, reference context (genome build, MANE/RefSeq transcript, HGVS), and allele-level molecular consequence through ACMG/AMP-ClinGen criteria, IGV/VEP/SpliceAI/gnomAD/ClinVar review, MIQE-compliant qPCR/ddPCR, and Sanger/NGS validation while treating allele dropout, pseudogene/paralog...

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Molecular Virologist · stanfish06 bundle
Expert-thinking profile for Molecular Virologist (wet-lab / reverse genetics & virus–host molecular mechanism): Reasons from Baltimore mRNA pathways, RNP/polymerase biochemistry, cap-snatching and expression strategy, CPER/BAC/trVLP rescue, protease cis/trans mapping, viral-factory LLPS, and CRISPR host-factor screens (Brunello/MAGeCK/replicon/TRPPC) with iCLIP/ChIP-seq—while treating CPER PCR errors, DIP packaging competition...

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Moody S Issuer Brief · stanfish06 bundle
Produce a comprehensive Issuer Brief HTML report for a company using Moody's GenAI MCP tools. Use this skill whenever the user asks to create an Issuer Brief, company profile report, credit memo, investment book, or comprehensive company analysis. Also trigger when they ask for a report combining company overview, financials, peer comparison, industry overview, strategic developments, management, credit profile, risks, and ESG into a single document. Trigger even if they just name a company and say "Issuer Brief", "info book", "company book", "credit book", or "full company report".

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Moody S Sector Brief · stanfish06 bundle
Produce a Sector Brief HTML report for any industry sector using Moody's GenAI MCP tools and web research. Use this skill whenever the user asks to analyze a sector, write a sector report, do an industry analysis, create a sector overview, or generate a sector deep-dive. Trigger even if they just name a sector and mention "analysis", "overview", "outlook", "report", or "deep-dive". Also trigger for phrases like "what's happening in the retail sector" or "give me a sector breakdown for aerospace".

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Neo4j Graphrag Skill · stanfish06 bundle
Build GraphRAG retrieval pipelines on Neo4j using the neo4j-graphrag Python package (v1.16.0+). Covers retriever selection (VectorRetriever, HybridRetriever, VectorCypherRetriever, HybridCypherRetriever, Text2CypherRetriever, ToolsRetriever), external vector DB retrievers (Weaviate, Pinecone, Qdrant), retrieval_query Cypher fragments, query_params, filters, GraphRAG pipeline wiring (GraphRAG + LLM + prompt), all LLM providers (OpenAI, Anthropic, VertexAI, Bedrock, Cohere, Mistral, Ollama), embedder setup, index creation, token usage tracking, Cypher 25 SEARCH clause, and LangChain/LlamaIndex integration. Does NOT handle KG construction — use neo4j-document-import-skill. Does NOT handle plain vector search — use neo4j-vector-index-skill. Does NOT handle GDS analytics — use neo4j-gds-skill. Does NOT handle agent memory — use neo4j-agent-memory-skill.

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Neuroendocrinologist · stanfish06 bundle
Expert-thinking profile for Neuroendocrinologist (wet-lab / in vivo physiology + translational neuroendocrine): Reasons from hypothalamic–pituitary portal axes (HPA, HPG, HPT), KNDy/GnRH pulsatility, SCN circadian gating, and SON/PVN neuropeptide release; uses HypoMap/HYPOMAP, stereotaxics with opto/chemogenetics, validated ELISA/RIA/FCM and LC-MS/MS, CoAL/CAR reporting, while treating bleed-stress corticosterone, pulse...

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Ngs Atacseq Peaks Qc · stanfish06 bundle
Run or plan ATAC-seq QC, alignment, TSS enrichment, fragment-size, blacklist, peak-calling, consensus peak, and differential accessibility workflows.

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Officecli Pitch Deck · stanfish06
Use this skill when the user is building a fundraising / investor pitch deck — seed, Series A / B / C, convertible note, SAFE round, strategic raise. Trigger on: 'pitch deck', 'investor deck', 'Series A deck', 'Series B deck', 'Series C deck', 'fundraising deck', 'seed pitch', 'VC deck', 'raising capital', 'term sheet presentation'. Output is a single .pptx. This skill is a scene layer on top of officecli-pptx — inherits every pptx v2 rule (visual floor, grid, palettes, connector canon, Delivery Gate). DO NOT invoke for a generic board review, sales deck, all-hands, or product launch — route those to officecli-pptx base.

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Proteomics Scientist · stanfish06 bundle
Expert-thinking profile for Proteomics Scientist (bottom-up LC-MS/MS / DDA-DIA-TMT- SILAC / differential abundance / FDR & batch control): Reasons from peptide-to-protein inference, acquisition mode, quantification modality, and missing-value mechanism through MaxQuant, FragPipe/MSFragger, DIA-NN/Spectronaut, Skyline, and MSstats/proDA while treating MNAR missingness, batch confounding, TMT co-isolation ratio compression, and keratin/contaminant signal...

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Quaternary Scientist · stanfish06 bundle
Expert-thinking profile for Quaternary Scientist (field geochronology / glacial geomorphology / multi-proxy paleoclimate / ice-core & tephra correlation): Reasons from dated landform-sediment-proxy associations, multi-method chronology, and ice-age cyclicity (MIS, orbital forcing) through radiocarbon/OSL/cosmogenic dating, Bayesian age models (OxCal, Bacon, IntCal20), tephrochronology, and GIA models while treating uncalibrated 14C years, incomplete OSL bleaching...

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React Best Practices · stanfish06 bundle
React and Next.js performance optimization guidelines from Vercel Engineering. Use when writing, reviewing, or refactoring React/Next.js code to ensure optimal performance patterns. Triggers on tasks involving React components, Next.js pages, data fetching, bundle optimization, or performance improvements.

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Check Bin Obj Clash · stanfish06
Detects MSBuild projects with conflicting OutputPath or IntermediateOutputPath. USE FOR: builds failing with 'Cannot create a file when that file already exists', 'The process cannot access the file because it is being used by another process', intermittent build failures that succeed on retry, or missing/overwritten outputs in multi-project or multi-targeting builds where bin/obj (or project.assets.json) collide. Common causes: shared OutputPath, missing AppendTargetFrameworkToOutputPath, extra global properties (e.g. PublishReadyToRun), or SetTargetFramework on a ProjectReference to a single-targeting project. DO NOT USE FOR: file access errors unrelated to MSBuild (OS-level locking), single-project single-TFM builds, non-MSBuild build systems.

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Chromatin Biologist · stanfish06 bundle
Expert-thinking profile for Chromatin Biologist (wet-lab / chromatin biochemistry / epigenomics): Reasons from nucleosome arrays, histone PTM crosstalk, remodelers, and 3D genome organization; validates ChIP/CUT&Tag/ATAC with spike-ins and IgG controls while separating composition from mechanism.

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Citation Management · stanfish06 bundle
Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. Use when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.

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Cognitive Scientist · stanfish06 bundle
Expert-thinking profile for Cognitive Scientist (behavioral experiments / computational modeling (DDM, ACT-R, Bayesian) / Marr levels / strong inference / preregistration): Reasons from Marr's levels of analysis, latent processes behind RT and accuracy, and strong inference through PsychoPy paradigms, signal-detection d-prime/criterion, sequential-sampling and ACT-R models, and crossed mixed-effects designs while treating speed-accuracy tradeoffs, criterion shifts, item confounds, and...

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Combustion Engineer · stanfish06 bundle
Expert-thinking profile for Combustion Engineer (experimental / combustion & propulsion): Reasons from stoichiometry, flame stability, emissions, and CFD-reacted flows while treating blow-off, flashback, and soot formation as first-class failure modes.

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Community Ecologist · stanfish06 bundle
Expert-thinking profile for Community Ecologist (field / experimental / multivariate community assembly): Reasons from Vellend's four processes and Chesson stabilizing/equalizing coexistence through PERMANOVA/betadisper, betapart turnover–nestedness, Gotelli SIM9/C-score null models, and vegan/entropart/picante pipelines while treating compositional closure, dispersion heterogeneity, and pseudoreplicated quadrats as...

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Composites Engineer · stanfish06 bundle
Expert-thinking profile for Composites Engineer (design / manufacturing / test / certification): Reasons from CLT/ABD laminate mechanics, Halpin–Tsai micromechanics, and CMH-17/NCAMP allowables through autoclave/OOA/RTM process control, ASTM D30 mechanical qualification, ultrasonic C-scan and CAI damage tolerance while treating fiber waviness, void content, under-cure, and quasi-isotropic strength traps as...

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Core Dynamic Skills · stanfish06 bundle
Internal command support for dynamic Rust crate skill management. Use only when explicitly invoked by /sync-crate-skills, /clean-crate-skills, or /update-crate-skill.

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Core Fix Skill Docs · stanfish06 bundle
Internal maintenance support for checking and fixing generated Rust skill documentation references. Use only when explicitly invoked by /fix-skill-docs.

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Earthquake Engineer · stanfish06 bundle
Expert-thinking profile for Earthquake Engineer (structural / bridge seismic design, analysis & retrofit): Reasons from ASCE 7 DRS and SDC, capacity design (R, Cd, Ω₀), ELF/MRS/NRHA and ASCE 41 pushover; models in SAP2000/ETABS/OpenSees with PEER NGA- West2 motions; treats liquefaction, soft-story P-delta collapse, and record-scaling artifacts as first-class failure modes.

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Ecosystem Ecologist · stanfish06 bundle
Expert-thinking profile for Ecosystem Ecologist (field / flux towers / biogeochemistry / process modeling): Reasons from NEE/NEP mass balance, ecological stoichiometry, and u*-filtered eddy covariance; processes with ONEFlux/REddyProc, NEON DP4.00200, and CENTURY/DayCent while treating gap-fill partitioning artifacts, chamber pressure pulses, harvest omission, and footprint shifts as first-class failure modes.

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Electrical Engineer · stanfish06 bundle
Expert-thinking profile for Electrical Engineer (circuits & boards / analog & power / SI & EMC / instrumentation / standards-based verification (IEC 62368, CISPR)): Reasons from Kirchhoff's laws, Maxwell's quasi-static limit, energy conservation, and LTI superposition through SPICE loop-gain and corner analysis, Bode gain/phase-margin checks, impedance-controlled layout, and IEC 62368/CISPR compliance, while treating unmodeled PCB parasitics, ground-return loops, protection...

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Electrophysiologist · stanfish06 bundle
Expert-thinking profile for Electrophysiologist (patch clamp / extracellular LFP & MEA / ion-channel biophysics / rig artifact compensation): Reasons from membrane voltage, conductance kinetics, series resistance, and filter settings through pClamp/Multiclamp acquisition, pharmacological channel isolation (TTX, NBQX/APV, picrotoxin), Hodgkin- Huxley/Markov gating fits, and NWB-standardized reporting while treating Rs drift, dialysis run-down, space clamp...

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Bio Human Feedback · stanfish06 bundle
Phase 2.6 of the bio-manuscript pipeline: human review checkpoint. Use when presenting a refined proposal to a human reviewer, collecting explicit feedback, recording approval or requested changes, and routing the workflow back to the correct phase.

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Browser Automation · stanfish06 bundle
统一自动化入口。覆盖浏览器自动化（Playwright）和 Windows 桌面应用自动化（OpenReverse）。浏览器场景：打开网页、点击、填表、爬取、截图、自动化登录、渗透页面交互。桌面场景：操作 IDA/x64dbg 等 GUI 工具、Windows UI Automation、视觉驱动交互、桌面应用网络抓包。触发关键词：浏览器自动化、桌面自动化、打开网页、填表、爬取、截图、自动化登录、Playwright、agent-browser、headless、OpenReverse、UIA、CUA、桌面操作、Windows 自动化。

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Catalysis Engineer · stanfish06 bundle
Expert-thinking profile for Catalysis Engineer (process catalysis / hydroprocessing & FCC / deactivation economics / regeneration / vendor qualification): Reasons from catalyst lifecycle margin, space velocity (WHSV/GHSV/LHSV), and deactivation economics through plant historian trends, MAT/pilot trickle-bed activity tests, Aspen HYSYS activity factors, and ASTM crush/attrition plus TPO/ICP spent-catalyst profiling while treating coke, poisoning, sintering, attrition...

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Cell Communication · stanfish06
Cell-cell / ligand-receptor communication analysis for single-cell data using LIANA+ (recommended consensus default), CellPhoneDB, CellChat (R), and squidpy's ligrec. Use for inferring cell-cell communication, ligand-receptor pairs, source->target signaling from an annotated .h5ad. Trigger terms - "cell-cell communication", "ligand-receptor", "CellPhoneDB", "CellChat", "LIANA", "cell interaction", "ligrec".

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Chemical Biologist · stanfish06 bundle
Expert-thinking profile for Chemical Biologist (wet-lab / chemoproteomics / probe discovery & target validation): Reasons from chemical genetics, ABPP/TPP/CETSA chemoproteomics, and SGC/Portal probe criteria; deconvolves phenotypic hits with PAINS/aggregator triage, inactive analogs, and genetic epistasis while treating colloidal aggregation, probe promiscuity, and degrader DC50/Dmax tag artifacts as first-class failure modes.

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Code Testing Agent · stanfish06 bundle
Generates and writes new unit tests for any programming language — scaffolds test projects and configures coverage tooling (coverlet, pytest-cov, @vitest/coverage-v8) as part of test generation. Use when asked to generate tests, generate pytest tests, generate Vitest tests, write unit tests, add tests, improve coverage, comprehensive tests, or scaffold a new test project or suite for an app, service, library, REST API, blueprint, or package — including project-wide, multi-file test generation across services, repositories, routes, and modules. Supports C#/.NET, Python (pytest, Flask/Django), TypeScript/JavaScript (Vitest, Jest, Mocha), Go, Rust, Java (JUnit). Runs a research, planning, and implementation pipeline so tests compile and pass. DO NOT USE FOR: running existing tests (use run-tests); analyzing existing coverage reports (use coverage-analysis or crap-score); writing, fixing, or modernizing MSTest-specific tests, assertions, attributes, or lifecycle (use writing-mstest-tests).

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Computer Scientist · stanfish06 bundle
Expert-thinking profile for Computer Scientist (theory + systems / algorithms & complexity / distributed data / formal methods (TLA+, Coq) / security (STRIDE, OWASP ASVS)): Reasons from computational models, abstraction contracts, invariants, and measurable complexity through CLRS-grade algorithm analysis, impossibility results (FLP, CAP, NP-hardness), property-based and chaos testing, and formal tools (TLA+, Coq, Z3) while treating partial failure, race conditions, label leakage, and...

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Core Agent Browser · stanfish06 bundle
Internal support skill for agent-browser CLI workflows used by rust-learner, docs-researcher, and crate-researcher. Use only when browser automation is explicitly required.

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Corrosion Engineer · stanfish06 bundle
Expert-thinking profile for Corrosion Engineer (field / laboratory / asset integrity & oil & gas infrastructure): Reasons from electrochemical couples, Pourbaix/galvanic selection, and ISO 15156 sour-service limits through AMPP SP0169/SP0502 CP and ECDA, CO₂ models (NORSOK M-506, OLI), coupon/ER/LPR monitoring, and ASTM G5/G48/G61 qualification while treating IR-masked CIPS, salt-spray overclaim, MIC vs. biocide residual, and...

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Data Visualization · stanfish06 bundle
Route web data visualization work. Use when the user needs chart choice, visual critique, dashboards, maps or geospatial views, Gantt timelines, UML/software diagrams, scrollytelling, reports or exports, testing, accessibility, browser implementation, or concept-first visual design.

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Deep Security Scan · stanfish06 bundle
Use when the user asks for a deep, exhaustive, multi-pass, or variance-reducing repository-wide or scoped-path Codex Security scan. Run repeated independent discovery passes over one resolved scope with worker-specific threat models, semantically merge candidates, synthesize one canonical validation threat model, then run validation, attack-path analysis, canonical JSON completion, and generated reporting once. Do not use for PRs, commits, branch diffs, or working-tree diffs.

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Reliability Engineer · stanfish06 bundle
Expert-thinking profile for Reliability Engineer (physics-of-failure / accelerated life testing (HALT/HASS/ALT) / Weibull & censored field analytics / RCM-FMECA / functional safety (ISO...): Reasons from failure mechanisms, time-to-failure distributions, censored field data, and stress-strength interference through FMECA, physics-of-failure models (Coffin-Manson, Arrhenius, Peck), Weibull and Crow-AMSAA growth analysis, and demonstration tests while treating mixture populations, wrong acceleration models...

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Statistical Analysis · stanfish06 bundle
Guided statistical analysis for research data - test selection, assumption checking, effect sizes, power analysis, Bayesian alternatives, and APA-formatted reporting. Use whenever a user wants to compare groups, test a hypothesis, analyze experimental or survey data, check statistical assumptions, compute required sample sizes, or write up results - even if they never name a specific test. Covers t-tests, ANOVA, chi-square, correlation, regression, non-parametric and Bayesian methods. For low-level model APIs, see the statsmodels and pymc skills.

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Structural Biologist · stanfish06 bundle
Expert-thinking profile for Structural Biologist (wet-lab / X-ray crystallography / cryo-EM / NMR): Reasons from the phase problem, CTF, and gold-standard FSC; refines with CCP4/PHENIX/RELION/cryoSPARC; validates with MolProbity and OneDep while treating preferred orientation, twinning, and radiation damage as first-class failure modes.

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Structural Geologist · stanfish06 bundle
Expert-thinking profile for Structural Geologist (field mapping / balanced cross sections / microstructural petrofabrics / active tectonics & paleoseismology / fault- slip inversion): Reasons from stress, strain, kinematics, and Mohr-Coulomb failure through stereonet fault-slip analysis, area-balanced cross sections in Move, quartz/calcite paleopiezometry on EBSD-indexed CPO, and geodetic-plus-trench slip-rate estimates while treating heterogeneous-fault paleostress inversion, map-pattern vergence...

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Technology Selection · stanfish06
Guides technology selection and implementation of AI and ML features in .NET 8+ applications using ML.NET, Microsoft.Extensions.AI (MEAI), Microsoft Agent Framework (MAF), GitHub Copilot SDK, ONNX Runtime, and OllamaSharp. Covers the full spectrum from classic ML through modern LLM orchestration to local inference. Use when adding classification, regression, clustering, anomaly detection, recommendation, LLM integration (text generation, summarization, reasoning), RAG pipelines with vector search, agentic workflows with tool calling, Copilot extensions, or custom model inference via ONNX Runtime to a .NET project. DO NOT USE FOR projects targeting .NET Framework (requires .NET 8+), the task is pure data engineering or ETL with no ML/AI component, or the project needs a custom deep learning training loop (use Python with PyTorch/TensorFlow, then export to ONNX for .NET inference).

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Web Game Foundations · stanfish06 bundle
Set browser-game architecture before implementation. Use when the user needs engine choice, simulation and render boundaries, input model, asset organization, or save/debug/performance strategy.

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Stable Baselines3 · stanfish06 bundle
Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasium environments. For high-performance parallel training, multi-agent systems, or custom vectorized environments, use pufferlib instead.

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Surface Physicist · stanfish06 bundle
Expert-thinking profile for Surface Physicist (UHV surface science / electron spectroscopy / scanning-probe microscopy / surface diffraction / catalysis & 2D epitaxy): Reasons from surface thermodynamics, adsorption coverage, work function, and probe escape depth through XPS/ARPES, LEED I(V) and CTR analysis, STM/AFM, TPD with Redhead analysis, and DFT slabs while treating adventitious-carbon contamination, differential charging, electron-beam and tip-induced damage, and...

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Surgeon Scientist · stanfish06 bundle
Expert-thinking profile for Surgeon-Scientist (clinical / research): Reasons from anatomy, pathophysiology, and the IDEAL stage of surgical innovation through IDE/IND pathways, NSQIP/STS registry risk-adjustment, CUSUM learning-curve analysis, and ischemia-timed biobank SOPs while treating unrisk-adjusted case series, indication- confounded surgeon-preference comparisons, cold-ischemia...

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Systems Biologist · stanfish06 bundle
Expert-thinking profile for Systems Biologist (computational / research): Reasons from network motifs, separation of structure from dynamics, mass-balance constraints, and multi-layer measurement coupling through COBRApy/FBA-pFBA-FVA, ODE/Boolean simulation (COPASI, BoolNet, CellNOpt), and MOFA+/mixOmics integration while treating batch artifacts, gap-filled reactions, parameter...

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UI CSS Primitives · stanfish06 bundle
Specifies CSS-level implementation primitives for UI work — OKLCH palette construction, motion duration and easing tokens, interactive and input state coverage, text-on-fill contrast pairing, and framework-agnostic responsive-correctness bugs. Use when writing or reviewing CSS tokens, building a colour palette, implementing interactive or input states, debugging a UI that looks "almost right", or fixing layout that breaks at narrow viewports.

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Using Superpowers · stanfish06 bundle
Use when discovering which skill applies — establishes how to find and use skills

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Wetland Scientist · stanfish06 bundle
Expert-thinking profile for Wetland Scientist (field / regulatory delineation / mapping / restoration & assessment): Reasons from the three-parameter delineation test (1987 Manual + Regional Supplements, NWPL, FISM), Cowardin/NWI/LLWW mapping, HGM function and Level 1–2–3 RAM, compensatory mitigation/RIBITS, and wetland carbon–GHG flux while treating legacy hydrology, 50/20 cover errors, relict redox nodules, NWI≠jurisdiction, and...

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Aeronomy Scientist · stanfish06 bundle
Expert-thinking profile for Aeronomy Scientist (remote sensing / MLT-thermosphere- ionosphere / ISR + resonance lidar / tides & coupling / empirical models (IRI, NRLMSIS)): Reasons from MLT lidar and ISR profiles through IRI/NRLMSIS benchmarks, treating ion-line spectra, metal-layer winds, and storm-time TEC as distinct observables.

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Aerospace Engineer · stanfish06 bundle
Expert-thinking profile for Aerospace Engineer (margin management / aero-structures- propulsion-GNC / V&V (FAR/CS, DO-178C, NASA-STD) / CFD-FEA-flight test): Reasons from margin-managed factors of safety, mass properties, and the analysis-test-similarity V&V hierarchy through FUN3D/SU2 CFD, NASTRAN/Abaqus FEA, JSBSim/Simulink 6-DOF, and FAR/CS, DO-178C, and NASA-STD compliance while treating flutter, buckling, inlet distortion, mass growth, and single-point failures as...

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Analytical Chemist · stanfish06 bundle
Expert-thinking profile for Analytical Chemist (wet-lab / separation science / spectroscopy / method validation): Reasons from the chemical measurement process through ICH Q2(R2) and USP <621> validation, CRM traceability, EURACHEM uncertainty budgets, and HPLC/GC/LC-MS/ICP-MS workflows while treating matrix effects, SST drift, peak tailing, and ion suppression as first-class failure modes.

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Batch Draft Writer · stanfish06 bundle
Drafts multiple email replies or follow-ups in batch using the Superhuman Mail MCP server — processing your inbox in bulk rather than one email at a time. Use this skill whenever someone asks to "draft replies to my unread emails", "respond to all my emails", "write follow-ups for my meetings this week", "batch draft responses", "draft emails for all threads that need a reply", "auto-draft my inbox", "help me respond to everything", "write follow-up emails based on my meetings", "process my inbox", "draft responses to these threads", or any variation of wanting multiple emails drafted at once. Also trigger when someone says "I have a bunch of emails to respond to", "help me get through my inbox", "draft a mail merge", "send personalized emails to these people", or wants to create multiple drafts from a single prompt. if someone wants more than one email drafted,

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Bio Dataset Search · stanfish06 bundle
Step 3 of the bio-manuscript pipeline: find and match public datasets to manuscript tasks. Use when extracting datasets from related papers or searching repositories (e.g. GEO), normalizing dataset metadata, and mapping datasets to the task system.

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Pavement Engineer · stanfish06 bundle
Expert-thinking profile for Pavement Engineer (mechanistic-empirical design / flexible & rigid pavements / NDE & forensics / asset management (MEPDG, FWD)): Reasons from layered-elastic stress/strain, traffic spectra, climate, and material temperature- dependence through AASHTOWare Pavement ME (MEPDG) hierarchical inputs, FWD deflection- basin backcalculation with GPR/core thickness, binder PG selection, and LTPP- calibrated transfer functions, while treating mis-specified...

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Plan Zoom Product · stanfish06 bundle
Use when choosing products.

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Plant Pathologist · stanfish06 bundle
Expert-thinking profile for Plant Pathologist (diagnostic clinic / field epidemiology / wet-lab & molecular phytopathology): Reasons from the disease triangle, sign vs. symptom, and trophic strategy (biotroph/necrotroph/hemibiotroph); runs clinic-to-Koch workflows (TWA isolation, Phytophthora pear baiting, Baermann nematodes, EPPO PM7/qPCR with matrix-specific Ct cutoffs) and epidemic analysis (AUDPC/AUDPS, Vanderplank parameters, GLMMs)...

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Polymer Scientist · stanfish06 bundle
Expert-thinking profile for Polymer Scientist (synthesis / characterization / rheology-morphology / polymer processing / failure analysis): Reasons from molecular weight distribution, Tg/Tm and crystallinity, viscoelasticity, and phase behavior through GPC/SEC, DSC heat-cool-heat, capillary and oscillatory rheology, WAXD/SAXS, and DMA while treating thermal-history erasure, moisture hydrolysis, incomplete cure, and wrong-grade-lot artifacts as first-class...

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Poultry Scientist · stanfish06 bundle
Expert-thinking profile for Poultry Scientist (pen/house trials / nutrition & feed formulation / gut health & coccidiosis / hatchery & incubation / processing yield / poultry welfare): Reasons from flock-level feed-to-gain conversion, digestible amino acid balance, and thermal/respiratory/pathogen load through FCR/EPEF and HDEP/HOF metrics, pen-or-house mixed models, coccidiosis lesion scoring, hatchery break-out, and strain management guides while treating subclinical coccidiosis and necrotic...

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Pubmed Summariser · stanfish06 bundle
Search PubMed for a gene name or disease term and generate a structured research briefing of the top recent English-language papers.

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Pytorch Lightning · stanfish06 bundle
Deep learning framework (PyTorch Lightning / lightning package). Organize PyTorch code into LightningModules, configure Trainers for multi-GPU/TPU, implement data pipelines, callbacks, logging (W&B, TensorBoard, MLflow), distributed training (DDP, FSDP, DeepSpeed), for scalable neural network training.

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Quantum Physicist · stanfish06 bundle
Expert-thinking profile for Quantum Physicist (theory / quantum information / open- system dynamics / device benchmarking / multi-platform hardware (superconducting, trapped-ion...): Reasons from Hilbert-space density operators, commutation relations, and Lindblad open-system dynamics through randomized benchmarking, gate-set and process tomography, Bell-CHSH tests, and Stim/PyMatching surface-code decoding while treating crosstalk, leakage, calibration drift, and measurement backaction as...

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Robotics Engineer · stanfish06 bundle
Expert-thinking profile for Robotics Engineer (hardware-software integration / manipulation, navigation & perception): Reasons from DH/PoE kinematics, Jacobian singularities, and computed-torque/impedance control through ROS 2, MoveIt/OMPL, Nav2/SLAM/AMCL, hand-eye AX=XB, Isaac/Gazebo sim-to-real, and ISO 10218/ISO TS 15066 safety while treating tf/frame errors, encoder drift, backlash, and reality-gap overclaim as first-class failure...

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Scientific Agents · stanfish06 bundle
Dispatcher for the K-Dense scientific-agents collection. Use when you need to choose among imported scientific and engineering expert profiles, such as bioinformatician, clinical epidemiologist, materials scientist, astrophysicist, or machine-learning researcher.

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Scientific Slides · stanfish06 bundle
Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design templates, timing guidance, and visual validation. Works with PowerPoint and LaTeX Beamer.

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Sequence Analysis · stanfish06
Analyze DNA/RNA/protein sequences. Use when the user provides a sequence and asks for analysis, translation, GC content, ORFs, motifs, restriction sites, or primer design. Triggers on "sequence", "translate", "GC content", "ORF", "primer", "restriction", "complement", "reverse complement".

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Modern Typescript · stanfish06
Modern TypeScript 5.x idioms — strict tsconfig (strict, noUncheckedIndexedAccess), the type system (unions/intersections, generics + constraints, narrowing, discriminated unions, unknown vs any, utility types, satisfies, as const, template-literal types), ESM & moduleResolution, and type-safe patterns (branded types, exhaustiveness). Use when configuring a tsconfig, writing or reviewing type-safe TypeScript, designing generics or a discriminated union, or decoding a tsc error.

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Molecular Docking · stanfish06
Use when running classical protein-ligand docking with AutoDock Vina, smina, or GNINA, including receptor or ligand preparation, search-box setup, docking, pose analysis, virtual screening, affinity scoring, or GNINA rescoring of DiffDock poses. Trigger terms include docking, PDBQT, binding pose, and protein-ligand.

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Network Scientist · stanfish06 bundle
Expert-thinking profile for Network Scientist (graph theory / community detection / generative models (SBM, ERGM) / network dynamics / null-model inference): Reasons from adjacency structure, generative models, and null hypotheses through configuration- model and SBM/ERGM nulls, CSN power-law fitting with log-normal Vuong tests, and multi-algorithm community detection (Louvain, Leiden, Infomap, graph-tool) while treating artifactual scale-free tails from correlation...

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Neurophysiologist · stanfish06 bundle
Expert-thinking profile for Neurophysiologist (wet-lab / intracellular & extracellular electrophysiology + spike sorting): Reasons from membrane biophysics, patch clamp Rs/seal quality, Neuropixels AP/LF streams, LFP referencing and spike contamination, Kilosort4/Phy curation, and stimulation-artifact suppression.

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Nuclear Physicist · stanfish06 bundle
Expert-thinking profile for Nuclear Physicist (experimental / theoretical / nuclear data & applications): Reasons from shell and collective structure, reaction mechanisms, and ENDF/EXFOR data; matches FRIB–CEBAF–RHIC science to R-matrix, Hauser- Feshbach, chiral ab initio, and GEANT4 tools; treats dead time, normalization, and evaluation covariances as first-class failure modes.

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Numerical Analyst · stanfish06 bundle
Expert-thinking profile for Numerical Analyst (theoretical / computational scientific computing): Reasons from well-posedness, discretization, conditioning, and stability; verifies codes with MMS and convergence studies; treats cancellation, stiffness, and solver tolerance floors as first-class failure modes.

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Omero Integration · stanfish06 bundle
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

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Optical Physicist · stanfish06 bundle
Expert-thinking profile for Optical Physicist (ultracold AMO / laser cooling & trapping / optical lattices & tweezers / precision clocks / quantum simulation): Reasons from quantized atom-field coupling, recoil and trap energy scales (Γ, E_rec, U/J, κ), and coupled instability-versus-systematic budgets through optical Bloch equations, in-situ lattice-depth and Rabi calibration, QuTiP and ARC modeling, and Allan-deviation and clock systematic tables, while treating...

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Paleoceanographer · stanfish06 bundle
Expert-thinking profile for Paleoceanographer (field / observational marine paleoceanography): Reasons from foraminiferal proxy system science (G. ruber, Cibicidoides, species/size fraction), Barker Mg/Ca cleaning and Anand/Gray calibrations, paired planktic δ¹⁸O–Mg/Ca and LR04 benthic stacks, IODP depth scales and splice ties, and AMOC fingerprints (benthic δ¹³C gradients, εNd, ²³¹Pa/²³⁰Th, sortable silt)...

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Firmware Pentest · stanfish06 bundle
固件 / IoT 渗透链。从拿到一坨 .bin / .img 开始，闭环走完逆向 → 提取 → 模拟 → 利用。方法论遵循 OWASP FSTM 九阶段；工具链以 binwalk v3、unblob、EMBA、Firmadyne、AFL++ 为主。适用场景：路由器/摄像头/智能家居固件审计、固件升级包逆向、IoT CVE 复现、嵌入式 0day 挖掘。触发关键词：固件、firmware、IoT、binwalk、unblob、UART、JTAG、squashfs、UBI、JFFS2、Firmadyne、QEMU 全系统仿真、EMBA、固件渗透、路由器固件、嵌入式漏洞利用、bootloader、NVRAM、FAT、firmware analysis toolkit。

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Fluid Dynamicist · stanfish06 bundle
Expert-thinking profile for Fluid Dynamicist (computational CFD / theoretical scaling / experimental validation): Reasons from Navier–Stokes and dimensionless scaling through RANS/LES/DNS selection, mesh/y+ strategy, OpenFOAM/Fluent workflows, and MMS + ASME V&V 20 / PIV validation.

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Forensic Chemist · stanfish06 bundle
Expert-thinking profile for Forensic Chemist (accredited crime lab / seized-drug & trace analysis / GC-MS & LC-MS/MS / courtroom reporting (SWGDRUG, ISO/IEC 17025, Daubert/Frye)): Reasons from chain of custody, validated methods, measurement uncertainty, and class-versus-individual characteristics through GC-MS, LC-MS/MS, FTIR, and SWGDRUG-aligned identification under ISO/IEC 17025, while treating carryover contamination, secondary transfer, isomer co-elution, and upgrading equivocal results...

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Fusion Scientist · stanfish06 bundle
Expert-thinking profile for Fusion Scientist (experimental plasma physics / integrated modeling / fusion systems): Reasons from Lawson triple product and Q through tokamak/stellarator confinement (H-mode, ELMs, RMP), NBI/ICRH/ECRH heating, EFIT/TRANSP/SOLPS-ITER workflows, ITER/JET/DIII-D/W7-X benchmarks, PMI (W/Be PFCs), and tritium breeding blankets.

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Game UI Frontend · stanfish06 bundle
Design UI surfaces for browser games. Use when the user asks for HUDs, menus, overlays, responsive layouts, or visual direction that must protect the playfield.

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Glycoengineering · stanfish06 bundle
Analyze and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated glycoengineering tools (NetOGlyc, GlycoShield, GlycoWorkbench). For glycoprotein engineering, therapeutic antibody optimization, and vaccine design.

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Health Economist · stanfish06 bundle
Expert-thinking profile for Health Economist (computational / HEOR / health technology assessment): Reasons from QALY/ICER and NMB opportunity-cost framing, NICE reference case and WTP bands, cohort Markov/PSM models with PSA (CEAC/CEAF), ISPOR transferability and DCE conjoint checklists, CHEERS 2022 and trial-based RCT-CEA reporting.

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Huggingface Jobs · stanfish06 bundle
Use when users want to run any workload on Hugging Face Jobs infrastructure. Covers UV scripts, Docker-based jobs, hardware selection, cost estimation, authentication with tokens, secrets management, timeout configuration, and result persistence. Designed for general-purpose compute workloads including data processing, inference, experiments, batch jobs, and any Python-based tasks. Use for tasks involving cloud compute, GPU workloads, or when users mention running jobs on Hugging Face infrastructure without local setup.

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Astrodynamicist · stanfish06 bundle
Expert-thinking profile for Astrodynamicist (computational / mission analysis / orbit determination / SSA): Reasons from two-body plus perturbation force models through Cowell/Encke propagation, batch LS and EKF orbit determination, SPICE/Horizons ephemerides, CCSDS OEM/CDM exchanges, and TEME–GCRF frame discipline while treating drag, stale TLE/B*, and covariance frame mismatch as first-class failure modes.

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Bindingdb Skill · stanfish06 bundle
Submit compact BindingDB REST API requests for ligand-target binding lookups by PDB, UniProt, or similarity search. Use when a user wants concise BindingDB summaries; save raw payloads only on request.

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Bio Task System · stanfish06 bundle
Step 2 of the bio-manuscript pipeline: design the task system. Use when identifying the dominant task taxonomy in a field and organizing it into a staged Level 1-4 difficulty ladder to prepare for downstream dataset and metric design.

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Biostatistician · stanfish06 bundle
Expert-thinking profile for Biostatistician (clinical / computational / trial and omics biostatistics): Reasons from estimands, SAPs, and error budgets; aligns ICH E9(R1), CONSORT/STROBE, multiplicity, MMRM, Cox survival, causal DAGs, and GWAS FDR while treating immortal time, ICEs, and batch confounding as first-class failure modes.

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Bridge Engineer · stanfish06 bundle
Expert-thinking profile for Bridge Engineer (structural design / load rating / inspection-NDE / codes (AASHTO LRFD, AREMA) / fatigue-fracture): Reasons from load paths, limit states, redundancy, and durability through AASHTO LRFD rating (LRFR/inventory vs. operating), FEM grillage and OpenSees models, HEC-18 scour analysis, and NDE such as half-cell potential and phased-array UT while treating fracture-critical fatigue details, lost composite action, scour...

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Bulk QA Answers · stanfish06 bundle
Bulk Q&A Answers skill for Datasite deal rooms. Use this skill whenever a sell-side deal team wants to answer multiple buyer questions at once, generate AI draft responses from VDR content, produce a Q&A tracker spreadsheet, or build a Q&A management dashboard. Triggers include: "answer the Q&A", "draft responses to buyer questions", "process the question list", "generate Q&A tracker", "answer all questions", "bulk answer", "Q&A management dashboard", "respond to diligence questions", or any request to systematically work through a list of buyer questions using data room content as the source. Use whenever a buyer has submitted questions and the deal team wants AI-assisted drafting. Do not use for individual one-off questions outside a structured Q&A process. Do not draft answers from general knowledge — all responses must come from the data room.

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Chronobiologist · stanfish06 bundle
Expert-thinking profile for Chronobiologist (wet-lab / computational / human circadian physiology): Reasons from TTFL molecular clocks, SCN–peripheral coupling, and zeitgeber entrainment (PRC); analyzes actigraphy, DLMO, and PER2::LUC with ClockLab/LumiCycle, MetaCycle/eJTK/LimoRhyde, and CircaDB/CGDB/ChronobioticsDB while separating masking from endogenous τ under constant routine/FD.

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Circleci Builds · stanfish06 bundle
Diagnose and fix failing CircleCI builds quickly and safely. Use when users ask to investigate failed CircleCI jobs, triage flaky pipelines, identify root causes from logs, and implement minimal fixes in configuration, test setup, or build-related code paths.

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Fuzzing Obstacles · stanfish06 bundle
Patches past the barriers that stop a fuzzer making progress — checksum and hash verification, magic-value validation, time-based seeds, and other non-deterministic global state. Covers locating the blocking check, neutering it behind a fuzzing build flag, and avoiding the false positives a patch can introduce. Use when a fuzzer is stuck at validation, when coverage shows large regions behind a checksum, or when valid inputs are impractical to generate.

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1088 published skills · page 6 of 11