stanfish06

@stanfish06 source repo

1.1k skills
0 followers
7 hours ago last updated

▌
LLM Security · stanfish06 bundle
Use for authorized security assessment of LLM applications and AI agents, including prompt injection, tool abuse, RAG exposure, memory poisoning, and model supply-chain risks.

0 installs
▌
Metagenomics · stanfish06 bundle
Shotgun metagenomics workflow with host-depletion-aware QC, taxonomic profiling, functional profiling, AMR follow-up, and reproducible community output tables.

0 installs
▌
Metallurgist · stanfish06 bundle
Expert-thinking profile for Metallurgist (physical / extractive / process metallurgy): Reasons from phase diagrams, TTT/CCT paths, and Scheil solidification through Jominy hardenability (ASTM A255), ASM heat-treat cycles, metallography (ASTM E3/E112/E407), and staged failure analysis while treating decarburization, quench cracking, HAZ liquation, hot tearing, and microsegregation as first-class failure...

0 installs
▌
Mineralogist · stanfish06 bundle
Expert-thinking profile for Mineralogist (laboratory / field mineral identification / crystallography / economic mineralogy): Reasons from crystal chemistry, Pauling coordination, and converging optics–XRD/Raman–EPMA evidence; uses RRUFF/Mindat/AMCSD and CNMNC Checklist 2025 while treating preferred orientation, clay EG/heat triads, metamict amorphization, and QEMSCAN library bias as first-class failure modes.

0 installs
▌
Morph Ppt 3d · stanfish06
3D Morph PPT — extends morph-ppt with GLB model insertion, cinematographic camera, model-content layout, and enriched visual design system.

0 installs
▌
Ngs Fastq Qc · stanfish06 bundle
Validate FASTQ inputs, run local FastQC/MultiQC QC, interpret QC signals, and optionally execute fastp or Cutadapt trimming branches without overwriting raw reads.

0 installs
▌
Obsidian CLI · stanfish06
Interact with Obsidian vaults using the Obsidian CLI to read, create, search, and manage notes, tasks, properties, and more. Also supports plugin and theme development with commands to reload plugins, run JavaScript, capture errors, take screenshots, and inspect the DOM. Use when the user asks to interact with their Obsidian vault, manage notes, search vault content, perform vault operations from the command line, or develop and debug Obsidian plugins and themes.

0 installs
▌
Parallel Web · stanfish06 bundle
Search the web, extract URL content, enrich datasets, and run deep research using parallel-cli, prioritizing academic and scientific sources. Use for ANY web-related task: looking things up, fetching pages or academic PDFs, bulk data enrichment, and exhaustive multi-source research reports — even when the user doesn't mention 'parallel' or 'web' explicitly.

0 installs
▌
Petrochemist · stanfish06 bundle
Expert-thinking profile for Petrochemist (refinery process chemistry / crude assay / fuels & lubricants spec testing / catalyst performance / standards (ASTM D02, EN 228/590)): Reasons from boiling range, hydrocarbon class, sulfur/nitrogen speciation, and octane/cetane drivers through SimDist and PIONA/SARA group-type analysis, CFR- engine RON/MON and cetane testing, refinery LP models, and ASTM/EN spec methods, while treating light-ends loss, assay mismatch versus plant yields, catalyst...

0 installs
▌
Pubmed Search · stanfish06
Search PubMed for scientific literature. Use when the user asks to find papers, search literature, look up research, find publications, or asks about recent studies. Triggers on "pubmed", "papers", "literature", "publications", "research on", "studies about".

0 installs
▌
Query Clinvar · stanfish06
Query ClinVar for clinical variant significance. Use when user asks about variant pathogenicity, genetic variants, clinical significance, or disease-causing mutations. Triggers on "clinvar", "pathogenic", "variant significance", "clinical significance", "disease variant", "mutation pathogenicity".

0 installs
▌
Query Ensembl · stanfish06
Query Ensembl for genomic data. Use when user asks about gene coordinates, genomic sequences, variants, gene structure, exons, transcripts, or species comparison. Triggers on "ensembl", "gene coordinates", "genomic location", "exon", "transcript", "variant location", "rsid", "rs number".

0 installs
▌
Query Uniprot · stanfish06
Query UniProt protein database. Use when user asks about protein sequences, functions, annotations, domains, or protein identifiers. Triggers on "uniprot", "protein function", "protein sequence", "gene product", "protein info".

0 installs
▌
Rna Biologist · stanfish06 bundle
Expert-thinking profile for RNA Biologist (mixed molecular RNA biology (wet-lab assay design) and computational transcriptomics): Reasons like a senior RNA biologist across transcription and nascent assays, splicing, m6A, CLIP/eCLIP, RNA-seq, ribosome profiling, and GENCODE/MANE annotation—with rigor, troubleshooting, and reporting norms.

0 installs
▌
Security Scan · stanfish06 bundle
Use for a standard, single-pass security audit of an entire repository or a scoped path, package folder, or submodule with no diff to review. This is the default repository scan. Do not use for PR/commit/branch/working-tree diffs, or for deep, multi-pass, or variance-reducing scans.

0 installs
▌
Skill Builder · stanfish06 bundle
Scaffold a new ClawBio skill from a spec file (JSON/YAML) or interactively — generates SKILL.md, Python skeleton, tests, and updates catalog.json

0 installs
▌
Sqlite Expert · stanfish06
SQLite expert for WAL mode, query optimization, embedded patterns, and advanced features. Use when working with .sqlite/.db files, SQLite schema design or migrations, PRAGMA tuning, FTS5 full-text search, JSON1, EXPLAIN QUERY PLAN, SQLITE_BUSY or locking errors, or choosing between SQLite and a client-server database.

0 installs
▌
Stratigrapher · stanfish06 bundle
Expert-thinking profile for Stratigrapher (outcrop + subsurface / sequence stratigraphy / well & seismic correlation / biostratigraphy / basin analysis (ICS, NACS)): Reasons from the material-strata-versus-conceptual-time distinction, accommodation-and-supply systems tracts, and confidence-tiered correlation through ICS/NACS codes, sequence surfaces (SB, MFS, TS), wireline and seismic well ties, and biostratigraphic FAD/LAD plus U-Pb and chemostratigraphic tie points, while...

0 installs
▌
Vaccinologist · stanfish06 bundle
Expert-thinking profile for Vaccinologist (translational / clinical development / regulatory CMC): Vaccine development expert for platform and adjuvant selection, validated immunogenicity (HAI/PRNT/OPA), CoP and immunobridging, VE/effectiveness trial design, CBER lot release, and Brighton AEFI reporting.

0 installs
▌
Vcf Annotator · stanfish06 bundle
Annotate VCF variants with Ensembl VEP, ClinVar, and gnomAD. Ranks variants by impact (HIGH/MODERATE/LOW/MODIFIER) and generates a reproducible report.

0 installs
▌
Vercel Queues · stanfish06 bundle
Vercel Queues guidance (public beta) — durable event streaming with topics, consumer groups, retries, and delayed delivery. $0.60/1M ops. Powers Workflow DevKit. Use when building async processing, fan-out patterns, or event-driven architectures.

0 installs
▌
Volcanologist · stanfish06 bundle
Expert-thinking profile for Volcanologist (field / observational / computational volcanology & hazard assessment): Reasons from mush reservoirs, volatile exsolution, and conduit fragmentation through WOVOdat/GVP unrest synthesis, MultiGAS–DOAS CO₂/SO₂, melt-inclusion thermobarometry, GACOS/ERA5 InSAR, LP/VLP/VOISS-Net seismology, BET_EF probabilistic forecasting, and LaMEVE recurrence while treating atmospheric InSAR artefacts, MI...

0 installs
▌
Proteomics · stanfish06 bundle
Mass spectrometry proteomics QC, quantification, comparative analysis, and export for DDA, DIA, and protein-level result tables.

0 installs
▌
Pybedtools · stanfish06
Python genomic interval arithmetic with BEDTools, complementing pysam, polars, and query for downstream tables. Use when intersecting, merging, subtracting, shuffling, finding closest features, computing coverage, or converting BED, GFF, GTF, VCF, BAM, and pandas DataFrames into interval operations.

0 installs
▌
Pylabrobot · stanfish06 bundle
Vendor-agnostic lab automation framework. Use when controlling multiple equipment types (Hamilton, Tecan, Opentrons, plate readers, pumps) or needing unified programming across different vendors. Best for complex workflows, multi-vendor setups, simulation. For Opentrons-only protocols with official API, opentrons-integration may be simpler.

0 installs
▌
Query Kegg · stanfish06
Query KEGG for biological pathways and gene info. Use when user asks about metabolic pathways, signaling pathways, pathway genes, or KEGG IDs. Triggers on "kegg", "pathway", "metabolic pathway", "signaling pathway", "pathway genes".

0 installs
▌
Render CLI · stanfish06 bundle
Installs and uses the Render CLI for deploys, logs, SSH, psql, Blueprint validation, and automation. Use when the user needs to run Render CLI commands, script deploys in CI/CD, authenticate with an API key, query services non-interactively, or troubleshoot CLI auth issues. Trigger terms: render CLI, render login, render deploys, render logs, render ssh, render psql, render blueprints validate, render skills, RENDER_API_KEY, non-interactive, CI/CD deploy.

0 installs
▌
Rust Daily · stanfish06 bundle
CRITICAL: Use for Rust news and daily/weekly/monthly reports. Triggers on: rust news, rust daily, rust weekly, TWIR, rust blog, Rust 日报, Rust 周报, Rust 新闻, Rust 动态

0 installs
▌
Scvi Tools · stanfish06 bundle
Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch effects, multimodal data. For standard analysis pipelines use scanpy.

0 installs
▌
Sec Report · stanfish06 bundle
SEC (size-exclusion chromatography) analysis with peak detection, oligomer classification, and publication-quality PDF report generation via Typst templates. Triggers on "SEC", "size exclusion", "chromatography", "oligomer analysis", "protein assembly", "SEC report".

0 installs
▌
Biochemist · stanfish06 bundle
Expert-thinking profile for Biochemist (wet-lab / biophysical characterization / metabolism): Reasons from thermodynamics, enzyme mechanisms, and binding energetics; designs orthogonal purification and assay readouts while controlling oxidation, aggregation, coupled assays, and activity-vs-abundance confounds.

0 installs
▌
Code Audit · stanfish06 bundle
Use for authorized source-code security review and SAST workflows including Semgrep, CodeQL patterns, dangerous API hunting, and fix verification.

0 installs
▌
Debug Zoom · stanfish06 bundle
Use when debugging issues.

0 installs
▌
Drug Photo · stanfish06 bundle
Medication photo to personalised PGx dosage card via Claude vision — snap a pill, get genotype-informed guidance

0 installs
▌
Eod Wrapup · stanfish06 bundle
Generates an end-of-day wrap-up using the Superhuman Mail MCP server — identifies open loops, unanswered emails, and action items from your day so you can leave work with a clear head. Use this skill whenever someone asks to "wrap up my day", "what's still open in my inbox", "end of day summary", "what do I still need to do", "any emails I missed today", "open loops in my inbox", "summarize my day", "what didn't I respond to", "daily review", "close out my day", "what fell through the cracks", or any variation of wanting to know what's unfinished before signing off. Also trigger when someone says "before I log off", "anything I'm forgetting", "daily debrief", "what should I tackle tomorrow", or wants an accounting of their email activity for the day. if someone wants to review what happened and what's still pending at the end of their workday,

0 installs
▌
Etetoolkit · stanfish06 bundle
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.

0 installs
▌
Ethologist · stanfish06 bundle
Expert-thinking profile for Ethologist (field / lab / comparative observational ethology): Reasons from Tinbergen's four questions and versioned species vs experimental ethograms; scores with BORIS (Cohen's κ per behavior), Altmann focal/scan budgets, and ARRIVE 2.0/study-plan lab reporting while treating observer expectation, field–lab arena mismatch, habituation, and pseudoreplication as first-class...

0 installs
▌
Geneticist · stanfish06 bundle
Expert-thinking profile for Geneticist (variant interpretation / GWAS-linkage / pedigree & crosses / population genetics (ACMG/AMP, ClinGen)): Reasons from particulate inheritance, segregation, recombination, allele frequency, and genotype- phenotype evidence through ACMG/AMP-ClinGen classification, gnomAD/ClinVar/OMIM, HPO phenotyping, and PLINK/GATK/VEP QC while treating sample swaps, cryptic relatedness, population stratification, LD tagging, phenocopies...

0 installs
▌
Genomicist · stanfish06 bundle
Expert-thinking profile for Genomicist (clinical / research): Reasons from reference- relative coordinates, haplotypes, variant classes, and sequencing-as-measurement through GATK/DeepVariant, VEP/ClinVar/gnomAD, GIAB/hap.py benchmarking, and ACMG/AMP- ClinGen frameworks while treating build mismatches, paralog/pseudogene and GC dropout artifacts, contamination and index hopping...

0 installs
▌
Geochemist · stanfish06 bundle
Expert-thinking profile for Geochemist (lab / field sampling / isotope & aqueous geochemistry / thermodynamic modeling): Reasons from Gibbs equilibria, mass and isotope balance, and fluid–rock interaction through stable (δ) and radiogenic (ε, isochron) systems, ICP-MS/LA-ICP-MS/TIMS/MC-ICP-MS/IRMS, PHREEQC/Perple_X phase modeling, and EarthChem/GeoReM workflows while treating alteration, matrix effects, Pb loss, mixing arrays, and...

0 installs
▌
Hla Typing · stanfish06 bundle
HLA allele typing from WGS/WES VCF data

0 installs
▌
Attack Chain · stanfish06 bundle
Use for authorized multi-stage attack-path planning and orchestration when a task spans reconnaissance, initial access, privilege escalation, lateral movement, or impact assessment. Route single-stage tasks directly to their specialist skill.

0 installs
▌
Biophysicist · stanfish06 bundle
Expert-thinking profile for Biophysicist (single-molecule biophysics / force spectroscopy / electrophysiology / structural (cryo-EM, NMR) / MD simulation): Reasons from energy landscapes, kT-scale thermodynamics, conformational ensembles, and the equilibrium-versus-kinetics distinction through smFRET, optical/magnetic tweezers, patch clamp, cryo-EM, and MD with force-field validation while treating photobleaching and blinking, FRET crosstalk, tether and series-resistance...

0 installs
▌
Cardiologist · stanfish06 bundle
Expert-thinking profile for Cardiologist (clinical / research): Reasons from oxygen supply-demand mismatch, forward flow, filling pressures, and pre-test probability through 12-lead ECG, TTE/TEE with ASE grading, cath hemodynamics, CMR, and ACC/AHA/ESC guidelines with risk scores like HEART, GRACE, and CHA2DS2-VASc, while treating context-free troponin elevation, low-flow...

0 installs
▌
Cosmochemist · stanfish06 bundle
Expert-thinking profile for Cosmochemist (meteorite petrology / isotope geochemistry / presolar grains): Reasons from oxygen three-isotope taxonomy (Δ17O), chondrite–achondrite classification, and presolar grain NanoSIMS through Meteoritical Bulletin curation, Al–Mg and Pb–Pb isochrons, CRE vs formation-age separation, and clean-lab sample prep while treating terrestrial weathering, mount contamination, and breccia...

0 installs
▌
Deal Tracker · stanfish06 bundle
Builds a relationship or deal summary using the Superhuman Mail MCP server — pulling together all email history, read receipts, and calendar interactions with a specific person or company to act as a lightweight CRM. Use this skill whenever someone asks to "show me all communication with [person/company]", "what's the status of my deal with [company]", "give me a relationship summary for [person]", "when did I last talk to [person]", "pull up everything about [company]", "track this deal", "who haven't I followed up with", "show me engagement on emails I sent to [person]", "CRM view of [person]", "what's my communication history with [person]", or any variation of wanting a consolidated view of a relationship or deal. if someone wants to understand the full picture of their interactions with a person or company,

0 installs
▌
Entomologist · stanfish06 bundle
Expert-thinking profile for Entomologist (field / lab / systematics / applied IPM): Reasons from tagmata, Comstock-Needham venation, and tarsal formula through trap-guild sampling (Malaise, pitfall, pan, light), host–parasitoid ecology, ICZN vouchers and genitalia keys, BOLD/GBIF/COL/iNaturalist triage, IUCN invertebrate caveats, CITES/COSE permits, Taylor/GLMM on the correct EU, and EIL/ET with IRAC...

0 installs
▌
Enzymologist · stanfish06 bundle
Expert-thinking profile for Enzymologist (wet-lab / steady-state & transient kinetics / inhibition mechanism / biocatalysis engineering / reporting (STRENDA, EnzymeML)): Reasons from catalytic mechanism, kcat/Km, elementary rate constants, and active-site [E]t through Michaelis-Menten and global fitting in KinTek Explorer, stopped- flow/quench-flow, SPR/BLI/ITC, and STRENDA/EnzymeML reporting while treating substrate inhibition, morpheein equilibria, coupled-assay artifacts, and...

0 installs
▌
Food Chemist · stanfish06 bundle
Expert-thinking profile for Food Chemist (analytical / regulatory food chemistry): Reasons from food matrix effects, aw and lipid oxidation, AOAC-validated HPLC/GC- MS/LC-MS/MS, FoodData Central/FNDDS, and trained sensory panels while treating matrix suppression, accelerated-shelf-life misuse, and untrained-taster data as first-class failure modes.

0 installs
▌
Gap Analysis · stanfish06 bundle
Data Room Gap Analysis skill for Datasite deal rooms. Use this skill whenever a sell-side deal team wants to audit what is missing, sparse, or incomplete in their data room before going live to buyers. Triggers include: "run a gap analysis", "what's missing from the data room", "check the data room coverage", "flag empty folders", "what haven't we uploaded yet", "data room readiness check", "find gaps before we go live", "are all the contracts in there", "check we have everything", or any request to assess completeness of the data room by section. Use whenever a deal team is preparing to launch a data room and wants to know what still needs to be uploaded or organised. Do not use for document quality issues such as PII or redaction (use document-quality-check), or for drafting Q&A responses (use bulk-qa-answers).

0 installs
▌
Geobiologist · stanfish06 bundle
Expert-thinking profile for Geobiologist (biosignature assessment / isotope geochemistry / microbe-mineral petrography / deep-biosphere -omics / astrobiology): Reasons from metabolism, redox geochemistry, microbe-mineral interactions, and diagenetic filters through stromatolite microfabric petrography, CSIA and clumped- isotopologue analysis, nanoSIMS-FISH mapping, and NASA's Ladder of Life Detection while treating Fischer-Tropsch-type synthesis, serpentinization, Rayleigh...

0 installs
▌
Geomagnetist · stanfish06 bundle
Expert-thinking profile for Geomagnetist (observatory / satellite / paleomag & rock magnetic lab): Reasons from spherical-harmonic main-field theory and remanence physics through IGRF-14/WMM2025 vs CHAOS-8 SV, INTERMAGNET baseline adoption (IBFV2.00), Swarm quiet-time modeling, stepwise AF/thermal demagnetization with PCA/Fisher, GEOMAGIA50/MagIC archaeomagnetic SVCs, and GFZ Kp/ap indices while treating...

0 installs
▌
Geophysicist · stanfish06 bundle
Expert-thinking profile for Geophysicist (field acquisition / processing / inversion / interpretation): Reasons from wavelength and skin-depth limits through earthquake catalogs (USGS ComCat, ObsPy/FDSN), Bouguer/IGRF gravity-magnetics, MT distortion and dimensionality, and SEG-Y reflection processing (NMO, migration) while treating statics, galvanic distortion, velocity ambiguity, and header mis-mapping as first- class...

0 installs
▌
Glaciologist · stanfish06 bundle
Expert-thinking profile for Glaciologist (field / remote sensing / ice-core paleoclimate / ice-sheet modeling): Reasons from mass-budget closure (SMB, dynamic discharge, calving), Glen flow law, and subglacial effective pressure through WGMS/GlaMBIE stake networks, ICESat-2/CryoSat altimetry with firn and radar- penetration corrections, ITS_LIVE velocities, ApRES basal melt, RES/MCoRDS bed picks, RGI/BedMachine inventories, OGGM...

0 installs
▌
Hematologist · stanfish06 bundle
Expert-thinking profile for Hematologist (clinical / research): Reasons from hematopoietic hierarchy, clonal evolution, and hemostatic balance through peripheral smear review, reticulocyte production index, flow cytometry, mixing studies, and WHO/ICC-anchored NGS and cytogenetics, while treating pseudothrombocytopenia, preanalytic line-draw and EDTA artifacts, and missed...

0 installs
▌
Neuroengineer · stanfish06 bundle
Expert-thinking profile for Neuroengineer (wet-lab / neural interfaces / chronic electrophysiology / translational regulatory): Reasons from electrode–electrolyte charge-density limits and foreign-body gliosis through Utah/Neuropixels chronic recording, EIS impedance spectroscopy, Kilosort3/MountainSort validation, FDA IDE pathways, and explant histology (GFAP/Iba1) while treating impedance drift, unvalidated auto-sort inflation, and...

0 installs
▌
Ngs Scrna Seq · stanfish06 bundle
Route single-cell or single-nucleus RNA-seq FASTQs to public count-generation workflows and defer post-count matrix QC, annotation, clustering, and UMAP analysis to the embedded scrna-seq-qc skill.

0 installs
▌
Oceanographer · stanfish06 bundle
Expert-thinking profile for Oceanographer (seagoing / interdisciplinary / water-mass & tracer analysis / air-sea flux & biogeochemistry / TEOS-10): Reasons from basin-scale budgets, three-dimensional circulation, and forcing-transport-transformation coupling through θ–S and OMP water-mass analysis, transient-tracer ventilation ages (CFC/SF₆/¹⁴C), GO-SHIP/Argo/SOCAT networks, and TEOS-10 thermodynamics while treating mesoscale aliasing of single sections, mixed...

0 installs
▌
Open Notebook · stanfish06 bundle
Self-hosted, open-source alternative to Google NotebookLM for AI-powered research and document analysis. Use when organizing research materials into notebooks, ingesting diverse content sources (PDFs, videos, audio, web pages, Office documents), generating AI-powered notes and summaries, creating multi-speaker podcasts from research, chatting with documents using context-aware AI, searching across materials with full-text and vector search, or running custom content transformations. Supports 16+ AI providers including OpenAI, Anthropic, Google, Ollama, Groq, and Mistral with complete data privacy through self-hosting.

0 installs
▌
Ornithologist · stanfish06 bundle
Expert-thinking profile for Ornithologist (field / observational / banding / bioacoustics / population monitoring): Reasons from detectability-limited surveys through BBS/MAPS protocols, distance sampling and unmarked occupancy, eBird/auk hygiene, BirdNET–Raven validation, BBL permitting, Pyle molt scoring, MOTUS/FlightR connectivity, and AviList/Clements taxonomy while treating roadside bias, space-for- time pseudo-replicates, and...

0 installs
▌
Paleobotanist · stanfish06 bundle
Expert-thinking profile for Paleobotanist (field / laboratory paleobotany & palynology): Reasons from phytotaphonomy and preservation mode (compression, permineralization, palynomorphs); prepares coal-ball peels and cuticle/maceral workflows; applies LMA/CLAMP/DiLP and stomatal/Franks CO₂ proxies; uses PBDB, Neotoma, IFPNI/PFNR, and ICN fossil-taxon nomenclature while treating transport bias...

0 installs
▌
Pentest Tools · stanfish06 bundle
主动渗透测试工具链。覆盖信息收集、端口扫描、漏洞扫描、Web 渗透、SQL 注入、目录爆破、密码破解等场景。通过 MCP server（pentestMCP / mcp-security-hub）将 20+ 安全工具暴露给 AI agent。触发关键词：渗透测试、端口扫描、Nmap、漏洞扫描、Nuclei、SQL 注入、SQLMap、目录爆破、FFUF、密码破解、Hashcat、信息收集、子域名、Web 渗透、ZAP、Burp。

0 installs
▌
Phylogenetics · stanfish06 bundle
Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.

0 installs
▌
Plant Breeder · stanfish06 bundle
Expert-thinking profile for Plant Breeder (field breeding / quantitative & molecular genetics / genomic selection / METs / cultivar release (DUS, UPOV/OECD)): Reasons from genetic variance, selection response (R = h²S), and breeding values through BLUP/GBLUP mixed models, multi-environment alpha-lattice trials with check cultivars, genomic selection validated within relatedness, and DUS/seed-certification standards, while treating linkage drag, G×E and G×management rank...

0 installs
▌
Primatologist · stanfish06 bundle
Expert-thinking profile for Primatologist (field / observational ethology / conservation / comparative & captive research): Reasons from Tinbergen questions, habituation trade-offs, and phylogenetic comparative trees (TimeTree, Craig 2024) through focal/scan ethograms (BORIS, κ), Raven/Praat vocal repertoires, IUCN SSC great-ape surveys (A.P.E.S.), and CITES/IACUC/IPS health protocols while treating pseudoreplication, anthroponotic...

0 installs
▌
Proteomics De · stanfish06 bundle
Differential expression analysis for label-free quantitative (LFQ) intensity data with standard MaxQuant and DIA-NN output. Workflow includes preprocessing, imputation, and statistical testing.

0 installs
▌
Hmdb Skill · stanfish06 bundle
Submit compact HMDB search requests for metabolites, proteins, diseases, and pathways. Use when a user wants concise HMDB summaries

0 installs
▌
JS Reverse · stanfish06 bundle
在使用 js-reverse-mcp 做前端 JavaScript 逆向时使用，适用于签名链路定位、页面观察取证、运行时采样、本地补环境复现与证据化输出。优先适配当前环境里的 js-reverse_* 工具，需要更强的浏览器/CDP/Hook 面时联动 jshookmcp。

0 installs
▌
Markitdown · stanfish06 bundle
Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.

0 installs
▌
Matplotlib · stanfish06 bundle
Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots use seaborn; for interactive plots use plotly; for publication-ready multi-panel figures with journal styling, use scientific-visualization.

0 installs
▌
Mycologist · stanfish06 bundle
Expert-thinking profile for Mycologist (field / herbarium / culture & molecular systematics): Reasons from fungal life cycles, voucher-first taxonomy, and integrated sporocarp–culture–ITS/multilocus workflows; uses MycoBank/UNITE/MaarjAM, FUSARIUM-ID, EPPO Q-bank, and MycoCosm while treating rich-media non-sporulation, ITS saturation in Fusarium/Penicillium, AMF SSU vs ITS misuse, environmental-DNA-only names...

0 installs
▌
Oncologist · stanfish06 bundle
Expert-thinking profile for Oncologist (clinical / multidisciplinary oncology): Stages with AJCC TNM and molecular prognostic groups, selects biomarker-matched therapy from NCCN guidelines, assesses response with RECIST 1.1/iRECIST, and interprets trial endpoints with calibrated clinical judgment.

0 installs
▌
Pacsomatic · stanfish06 bundle
Operator toolkit for nf-core/pacsomatic matched tumor-normal workflows from BAM inputs. Use this skill when the user needs to validate run inputs, generate pacsomatic-compliant samplesheets, prepare reproducible Nextflow launch artifacts, run locally or submit to schedulers (LSF/Slurm/PBS/SGE), and triage execution failures. Triggers on requests to run pacsomatic, prepare launch commands/scripts, perform dry-run checks, or troubleshoot pipeline startup and scheduler submission errors.

0 installs
▌
Pedologist · stanfish06 bundle
Expert-thinking profile for Pedologist (soil survey / pedon morphology / classification (USDA Taxonomy, WRB) / micromorphology / digital soil mapping): Reasons from CLORPT factors, genetic horizons, and catenary position through the USDA Field Book, Soil Taxonomy and WRB 2022 keys, XRD clay mineralogy, micromorphology, and NASIS/SSURGO correlation while treating colluvial-versus-illuvial Bt confusion, lithologic discontinuities, surface-color-alone drainage calls...

0 installs
▌
Polars Bio · stanfish06 bundle
High-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames. Overlap, nearest, merge, coverage, complement, subtract for BED/VCF/BAM/GFF intervals. Streaming, cloud-native, faster bioframe alternative.

0 installs
▌
Turborepo · stanfish06 bundle
Turborepo expert guidance. Use when setting up or optimizing monorepo builds, configuring task caching, remote caching, parallel execution, or the --affected flag for incremental CI.

0 installs
▌
Zoologist · stanfish06 bundle
Expert-thinking profile for Zoologist (field / museum / lab / integrative animal biology): Reasons from Bauplan, homoplasy, and voucher-backed ICZN taxonomy through COL/WoRMS/GBIF IPT, VertNet/Arctos curation, Folmer COI/BOLD BIN, geomorph GPA, IQ- TREE phylogenetics, and Distance/MARK occupancy–abundance models while treating trap selectivity, checklist drift, barcode-only species, and morphometric...

0 installs
▌
Adjusttext · stanfish06 bundle
Use the Python adjustText package to automatically move matplotlib text labels so they do not overlap each other, points, or other artists. Use for crowded scatter plots, volcano plots, PCA/UMAP labels, line-end annotations, maps, and publication figures that need readable labels with optional arrows. Pairs with matplotlib, seaborn, scanpy, and scientific-visualization workflows.

0 installs
▌
Agents Sdk · stanfish06 bundle
Build AI agents on Cloudflare Workers using the Agents SDK. Load when creating stateful agents, durable workflows, real-time WebSocket apps, scheduled tasks, MCP servers, or chat applications. Covers Agent class, state management, callable RPC, Workflows integration, and React hooks. Biases towards retrieval from Cloudflare docs over pre-trained knowledge.

0 installs
▌
Agronomist · stanfish06 bundle
Expert-thinking profile for Agronomist (field / observational / extension & farm decision support): Reasons from 4R stewardship and G×E×M through MRTN economic N, calibrated soil-test extractants, penetrometer compaction diagnosis, on-farm strip mixed models, partial budgets, and AgroEcoList reporting while treating pseudo- replication, yield-monitor drift, and yield-goal N over-application as first-class failure...

0 installs
▌
AI Gateway · stanfish06 bundle
Vercel AI Gateway expert guidance. Use when configuring model routing, provider failover, cost tracking, or managing multiple AI providers through a unified API.

0 installs
▌
Algebraist · stanfish06 bundle
Expert-thinking profile for Algebraist (pure math / structure & morphisms / homological & representation theory / computational algebra (GAP, Sage, Singular) / formal proof (Lean...): Reasons from carriers, operations, and morphisms through isomorphism theorems, universal properties, exact-sequence and homological tools (Ext, Tor, snake lemma), and computational systems like GAP, Magma, SageMath, and Lean while treating silently smuggled hypotheses (commutativity, units, Noetherian, algebraically...

0 installs
▌
Astronomer · stanfish06 bundle
Expert-thinking profile for Astronomer (observational / survey / time-domain / solar- system): Reasons like a senior observational astronomer from the telescope and catalog outward — Landolt/Stetson photometry, Gaia/MPC astrometry, Horizons ephemerides, SDSS–ZTF–Rubin survey discipline, TOPCAT cross-matches, and calibrated detection vs upper-limit reporting.

0 installs
▌
Base44 CLI · stanfish06 bundle
The base44 CLI covers base44 projects: resource configuration (entities, backend functions, ai agents), initialization and actions (resource creation, deployment). This skill is the place for learning about how to configure resources. Read this skill when planning or implementing a feature.

0 installs
▌
Base44 Sdk · stanfish06 bundle
The base44 SDK is the library to communicate with base44 services. In projects, you use it to communicate with remote resources (entities, backend functions, ai agents) and to write backend functions. This skill is the place for learning about available modules and types. Read this skill when planning or implementing a feature.

0 installs
▌
Plugin Eval · stanfish06 bundle
Help engineers evaluate a local skill or plugin, explain why it scored that way, show what to fix first, measure real token usage, benchmark starter scenarios, or decide what to run next. Use when the user says things like "evaluate this skill", "give me an analysis of the game dev skill", "why did this score that way", "what should I fix first", "measure the real token usage of this skill", or "what should I run next?".

0 installs
▌
Probabilist · stanfish06 bundle
Expert-thinking profile for Probabilist (theoretical / computational probability): Reasons from Kolmogorov measure spaces through LLN/CLT, martingales, coupling, concentration/LDP, and Lévy/Feller/Itô calculus; uses Durrett/Kallenberg canon, Sage/NumPy/PyMC simulation, and R̂/ESS/IS diagnostics while treating a.s. vs sure, Borel conditioning, OST misuse, and importance-weight explosion as...

0 installs
▌
Radiologist · stanfish06 bundle
Expert-thinking profile for Radiologist (clinical / diagnostic imaging interpretation): Reasons from modality–question fit, contrast kinetics, and ACR Appropriateness Criteria (1–9); applies BI-RADS, LI-RADS, PI-RADS, and Lung-RADS with Fleischner/incidental-findings algorithms; integrates PACS/RIS/DICOM/IHE workflows, CTDIvol/DLP/DIR dose stewardship, and critical-results communication while treating...

0 installs
▌
Rust Router · stanfish06 bundle
CRITICAL: Use for ALL Rust questions including errors, design, and coding. HIGHEST PRIORITY for: 比较, 对比, compare, vs, versus, 区别, difference, 最佳实践, best practice, tokio vs, async-std vs, 比较 tokio, 比较 async, Triggers on: Rust, cargo, rustc, crate, Cargo.toml, 意图分析, 问题分析, 语义分析, analyze intent, question analysis, compile error, borrow error, lifetime error, ownership error, type error, trait error, value moved, cannot borrow, does not live long enough, mismatched types, not satisfied, E0382, E0597, E0277, E0308, E0499, E0502, E0596, async, await, Send, Sync, tokio, concurrency, error handling, 编译错误, compile error, 所有权, ownership, 借用, borrow, 生命周期, lifetime, 类型错误, type error, 异步, async, 并发, concurrency, 错误处理, error handling, 问题, problem, question, 怎么用, how to use, 如何, how to, 为什么, why, 什么是, what is, 帮我写, help me write, 实现, implement, 解释, explain

0 installs
▌
Sandbox Sdk · stanfish06 bundle
Build sandboxed applications for secure code execution. Load when building AI code execution, code interpreters, CI/CD systems, interactive dev environments, or executing untrusted code. Covers Sandbox SDK lifecycle, commands, files, code interpreter, and preview URLs. Biases towards retrieval from Cloudflare docs over pre-trained knowledge.

0 installs
▌
Tribologist · stanfish06 bundle
Expert-thinking profile for Tribologist (tribometry / contact mechanics & EHL / lubricant & coating selection / wear failure analysis / condition monitoring (ASTM G99, ISO 281/4406)): Reasons from contact mechanics, lubricant rheology, Stribeck- regime and λ ratio through Hamrock-Dowson EHL film estimates, pin-on-disk/four- ball/SRV/FZG bench tests and SEM-EDS/ferrography scar analysis while treating scuffing, rolling-contact pitting, three-body abrasion and DLC adhesive transfer as first-class...

0 installs
▌
Zarr Python · stanfish06 bundle
Chunked N-D arrays for cloud storage (Zarr-Python 3). Compressed arrays, parallel I/O, S3/GCS via fsspec, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.

0 installs
▌
API Security · stanfish06 bundle
Use for authorized security assessment of REST, GraphQL, WebSocket, or SOAP APIs, including discovery, authentication, authorization, rate-limit, and CI/CD testing.

0 installs
▌
Astrochemist · stanfish06 bundle
Expert-thinking profile for Astrochemist (observational / laboratory / computational / interstellar & circumstellar chemistry): Reasons from gas-grain reaction networks, H₂ ortho/para and CR ionization rates through KIDA/kida.uva.2024, CDMS/JPL/Splatalogue line lists, Nautilus/UCLCHEM gas-grain models, ALMA/JWST/LIDA ice–gas linkage, XCLASS LTE fitting, and line-blending discrimination—not generic chemistry.

0 installs
▌
Heygen Avatar · stanfish06 bundle
Use when creating or configuring a persistent HeyGen avatar or digital twin for the agent, the user, or a named presenter, including prompt-based avatar creation, photo-based identity setup, voice selection, or passing an avatar identity to video generation. If a request combines avatar creation with video generation, use this before the video skill. Do not use for video generation alone, translation, TTS-only tasks, or streaming avatars.

0 installs
▌
Hvac Engineer · stanfish06 bundle
Expert-thinking profile for HVAC Engineer (load calc / psychrometrics / system selection / refrigeration / TAB & commissioning (ASHRAE 62.1, 90.1, Guideline 36)): Reasons from psychrometric state, parallel heating and cooling load paths, and vapor- compression thermodynamics through TRACE/HAP and EnergyPlus load models, ASHRAE 62.1/55/90.1 and Guideline 36 sequences, and TAB/commissioning per ASHRAE 15/34, while treating low ΔT syndrome, simultaneous reheat fight, coil-leaving...

0 installs
▌
Ichthyologist · stanfish06 bundle
Expert-thinking profile for Ichthyologist (field / museum / fisheries science / ichthyoplankton / eDNA): Reasons from meristic fin formulae, sagittal otolith annuli/daily increments, larval flexion staging, and ICZN type discipline through Eschmeyer's Catalog, FishBase/WoRMS, MiFish/12S eDNA with blank controls, FSA/TropFishR/SS3 stock assessment, and Darwin Core museum metadata while treating CPUE catchability...

0 installs
▌
Improve Skill · stanfish06 bundle
Turn plugin-eval findings into a concrete rewrite brief for a Codex skill. Use when the user already evaluated a skill and now wants Codex to improve it, especially after asking what to fix first.

0 installs
▌
Latex Posters · stanfish06 bundle
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. This is the default poster skill for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, figure integration, and poster-specific best practices. For editable PowerPoint output, use pptx-posters (HTML/CSS-based) or poster-presentation (python-pptx-based) instead.

0 installs
▌
Macos Reverse · stanfish06 bundle
Use for authorized macOS and Mach-O reverse engineering including codesign, Objective-C/Swift recovery, endpoint security surfaces, and Apple platform malware analysis.

0 installs

1088 published skills · page 9 of 11